RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 DEFB136Q30KP8 78 aa11.11□□□□□ -0.63
LTBR-209ENST00000541102 TMEM65Q6PI78 240 aa11.11□□□□□ -0.63
LTBR-209ENST00000541102 MRAPQ8TCY5 172 aa11.11□□□□□ -0.63
LTBR-209ENST00000541102 ABHD5Q8WTS1 349 aa11.11□□□□□ -0.63
LTBR-209ENST00000541102 S100ZQ8WXG8 99 aa11.11□□□□□ -0.63
LTBR-209ENST00000541102 RAX2Q96IS3 184 aa11.11□□□□□ -0.63
LTBR-209ENST00000541102 PRRT1Q99946 306 aa11.11□□□□□ -0.63
LTBR-209ENST00000541102 AURKAIP1Q9NWT8 199 aaPredicted RBP11.11□□□□□ -0.63
LTBR-209ENST00000541102 GPR132Q9UNW8 380 aa11.11□□□□□ -0.63
LTBR-209ENST00000541102 FBXO7Q9Y3I1 522 aa11.11□□□□□ -0.63
LTBR-209ENST00000541102 PRKDCP78527 4128 aaKnown RBP11.11□□□□□ -0.63
LTBR-209ENST00000541102 TNCP24821 2201 aa11.11□□□□□ -0.63
LTBR-209ENST00000541102 MPPED1O15442 326 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 IGKV1-39P01597 117 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 IGKV1D-39P04432 117 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 CTSDP07339 412 aaPredicted RBP11.1□□□□□ -0.63
LTBR-209ENST00000541102 SAA1P0DJI8 122 aaPredicted RBP11.1□□□□□ -0.63
LTBR-209ENST00000541102 RRASP10301 218 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 RPA2P15927 270 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 F2RP25116 425 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 HOXD3P31249 432 aaPredicted RBP11.1□□□□□ -0.63
LTBR-209ENST00000541102 CDX1P47902 265 aaPredicted RBP11.1□□□□□ -0.63
LTBR-209ENST00000541102 RND3P61587 244 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 ECSCRQ19T08 205 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 LPCAT3Q6P1A2 487 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 SSX9Q7RTT3 188 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 CMTM1Q8IZ96 169 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 RNF152Q8N8N0 203 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 OR4S2Q8NH73 311 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 TMEM230Q96A57 120 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 TP53RKQ96S44 253 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 P2RX4Q99571 388 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 TSNAXQ99598 290 aaKnown RBP11.1□□□□□ -0.63
LTBR-209ENST00000541102 RNF5Q99942 180 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 KLK15Q9H2R5 256 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 ZNF580Q9UK33 172 aa11.1□□□□□ -0.63
LTBR-209ENST00000541102 ARPC1BO15143 372 aaKnown RBP11.09□□□□□ -0.63
LTBR-209ENST00000541102 DUS4LO95620 317 aaKnown RBP11.09□□□□□ -0.63
LTBR-209ENST00000541102 EGR2P11161 476 aaPredicted RBP11.09□□□□□ -0.63
LTBR-209ENST00000541102 PSMB8P28062 276 aa11.09□□□□□ -0.63
LTBR-209ENST00000541102 PPIFP30405 207 aaKnown RBP11.09□□□□□ -0.63
LTBR-209ENST00000541102 LPAR6P43657 344 aa11.09□□□□□ -0.63
LTBR-209ENST00000541102 LGALS7P47929 136 aa11.09□□□□□ -0.63
LTBR-209ENST00000541102 INPP1P49441 399 aa11.09□□□□□ -0.63
LTBR-209ENST00000541102 CX3CL1P78423 397 aa11.09□□□□□ -0.63
LTBR-209ENST00000541102 CATR1Q13166 79 aa11.09□□□□□ -0.63
LTBR-209ENST00000541102 ZNF846Q147U1 533 aa11.09□□□□□ -0.63
LTBR-209ENST00000541102 SP6Q3SY56 376 aa11.09□□□□□ -0.63
LTBR-209ENST00000541102 OSR1Q8TAX0 266 aaPredicted RBP11.09□□□□□ -0.63
LTBR-209ENST00000541102 ZFAND1Q8TCF1 268 aa11.09□□□□□ -0.63
LTBR-209ENST00000541102 CCDC32Q9BV29 185 aa11.09□□□□□ -0.63
LTBR-209ENST00000541102 PRR13Q9NZ81 148 aa11.09□□□□□ -0.63
LTBR-209ENST00000541102 SCP2D1Q9UJQ7 156 aa11.09□□□□□ -0.63
LTBR-209ENST00000541102 TBC1D24Q9ULP9 559 aa11.09□□□□□ -0.63
LTBR-209ENST00000541102 TRAV3A0A0B4J244 114 aa11.08□□□□□ -0.64
LTBR-209ENST00000541102 RBFOX2O43251 390 aaKnown RBP eCLIP11.08□□□□□ -0.643e-10■■■■□ 19.3
LTBR-209ENST00000541102 SPDEFO95238 335 aa11.08□□□□□ -0.64
LTBR-209ENST00000541102 CA2P00918 260 aa11.08□□□□□ -0.64
LTBR-209ENST00000541102 MYOD1P15172 320 aa11.08□□□□□ -0.64
LTBR-209ENST00000541102 FAUP35544 74 aaKnown RBP11.08□□□□□ -0.64
LTBR-209ENST00000541102 KIR2DS2P43631 304 aa11.08□□□□□ -0.64
LTBR-209ENST00000541102 KRTAP10-11P60412 298 aa11.08□□□□□ -0.64
LTBR-209ENST00000541102 UBE2KP61086 200 aa11.08□□□□□ -0.64
LTBR-209ENST00000541102 CBX3Q13185 183 aa11.08□□□□□ -0.64
LTBR-209ENST00000541102 SURF2Q15527 256 aaPredicted RBP11.08□□□□□ -0.64
LTBR-209ENST00000541102 BORCS5Q969J3 196 aa11.08□□□□□ -0.64
LTBR-209ENST00000541102 ZNF486Q96H40 463 aaPredicted RBP11.08□□□□□ -0.64
LTBR-209ENST00000541102 OR5B12Q96R08 314 aa11.08□□□□□ -0.64
LTBR-209ENST00000541102 WDR12Q9GZL7 423 aaKnown RBP11.08□□□□□ -0.64
LTBR-209ENST00000541102 FLVCR2Q9UPI3 526 aa11.08□□□□□ -0.64
LTBR-209ENST00000541102 A0A1W2PN81 502 aa11.07□□□□□ -0.64
LTBR-209ENST00000541102 UPK1BO75841 260 aa11.07□□□□□ -0.64
LTBR-209ENST00000541102 CHRNA7P36544 502 aa11.07□□□□□ -0.64
LTBR-209ENST00000541102 RAB9AP51151 201 aa11.07□□□□□ -0.64
LTBR-209ENST00000541102 GNB1P62873 340 aa11.07□□□□□ -0.64
LTBR-209ENST00000541102 PPP1R27Q86WC6 154 aa11.07□□□□□ -0.64
LTBR-209ENST00000541102 PUSL1Q8N0Z8 303 aaKnown RBP11.07□□□□□ -0.64
LTBR-209ENST00000541102 ZNF491Q8N8L2 437 aa11.07□□□□□ -0.64
LTBR-209ENST00000541102 TEX45Q8NA69 505 aa11.07□□□□□ -0.64
LTBR-209ENST00000541102 CASTOR1Q8WTX7 329 aa11.07□□□□□ -0.64
LTBR-209ENST00000541102 C4orf3Q8WVX3 66 aa11.07□□□□□ -0.64
LTBR-209ENST00000541102 DPF1Q92782 380 aa11.07□□□□□ -0.64
LTBR-209ENST00000541102 RHOVQ96L33 236 aa11.07□□□□□ -0.64
LTBR-209ENST00000541102 FAM103A1Q9BTL3 118 aaKnown RBP11.07□□□□□ -0.64
LTBR-209ENST00000541102 MCRIP2Q9BUT9 160 aaKnown RBP11.07□□□□□ -0.64
LTBR-209ENST00000541102 GPR61Q9BZJ8 451 aa11.07□□□□□ -0.64
LTBR-209ENST00000541102 ZNF430Q9H8G1 570 aaPredicted RBP11.07□□□□□ -0.64
LTBR-209ENST00000541102 GNB4Q9HAV0 340 aa11.07□□□□□ -0.64
LTBR-209ENST00000541102 COPZ2Q9P299 210 aa11.07□□□□□ -0.64
LTBR-209ENST00000541102 C14orf166Q9Y224 244 aaKnown RBP11.07□□□□□ -0.64
LTBR-209ENST00000541102 C3orf85A0A1B0GTC6 90 aa11.06□□□□□ -0.64
LTBR-209ENST00000541102 CRYM-AS1A6NIL9 109 aa11.06□□□□□ -0.64
LTBR-209ENST00000541102 LYRM1O43325 122 aa11.06□□□□□ -0.64
LTBR-209ENST00000541102 HPRT1P00492 218 aa11.06□□□□□ -0.64
LTBR-209ENST00000541102 IGLV1-40P01703 118 aa11.06□□□□□ -0.64
LTBR-209ENST00000541102 IL6RP08887 468 aaPredicted RBP11.06□□□□□ -0.64
LTBR-209ENST00000541102 G6PCP35575 357 aa11.06□□□□□ -0.64
LTBR-209ENST00000541102 SUPT4H1P63272 117 aaKnown RBP11.06□□□□□ -0.64
LTBR-209ENST00000541102 TMEM267Q0VDI3 215 aaPredicted RBP11.06□□□□□ -0.64
LTBR-209ENST00000541102 KIAA0141Q14154 515 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms