RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 IFNA5P01569 189 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 PPIAL4FP0DN26 164 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 RAB11AP62491 216 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 LTC4SQ16873 150 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 FAM90A2PQ658T7 463 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 SLC25A24Q6NUK1 477 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 C1orf87Q8N0U7 546 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 ZNF295-AS1Q8N0V1 137 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 FAM210BQ96KR6 192 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 BBC3Q96PG8 261 aaPredicted RBP14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 NEU1Q99519 415 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 HIST1H2BLQ99880 126 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 RALYQ9UKM9 306 aaKnown RBP14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 PPIAL4AQ9Y536 164 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 TRAV38-1A0A0B4J264 116 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 SNRPCP09234 159 aaKnown RBP14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 PAX1P15863 534 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 TMEM267Q0VDI3 215 aaPredicted RBP14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 RNF150Q9ULK6 438 aa14.11□□□□□ -0.15
PCDHB17P-201ENST00000539533 IGHV1-69-2A0A0G2JMI3 117 aa14.1□□□□□ -0.15
PCDHB17P-201ENST00000539533 SPINT2O43291 252 aa14.1□□□□□ -0.15
PCDHB17P-201ENST00000539533 GZMHP20718 246 aa14.1□□□□□ -0.15
PCDHB17P-201ENST00000539533 F2RP25116 425 aa14.1□□□□□ -0.15
PCDHB17P-201ENST00000539533 GPR146Q96CH1 333 aa14.1□□□□□ -0.15
PCDHB17P-201ENST00000539533 KCNS2Q9ULS6 477 aa14.1□□□□□ -0.15
PCDHB17P-201ENST00000539533 LYNX1G3V0Z9 82 aa14.1□□□□□ -0.15
PCDHB17P-201ENST00000539533 LYNX1P0DP58 116 aa14.1□□□□□ -0.15
PCDHB17P-201ENST00000539533 BCL2P10415 239 aa14.1□□□□□ -0.15
PCDHB17P-201ENST00000539533 CR1LQ2VPA4 569 aa14.1□□□□□ -0.15
PCDHB17P-201ENST00000539533 NINJ1Q92982 152 aa14.1□□□□□ -0.15
PCDHB17P-201ENST00000539533 RPRMQ9NS64 109 aa14.1□□□□□ -0.15
PCDHB17P-201ENST00000539533 A0A1B0GU03 582 aa14.09□□□□□ -0.15
PCDHB17P-201ENST00000539533 ZFP92A6NM28 416 aa14.09□□□□□ -0.15
PCDHB17P-201ENST00000539533 KIAA1324LA8MWY0 1029 aaPredicted RBP14.09□□□□□ -0.15
PCDHB17P-201ENST00000539533 RAB4BP61018 213 aa14.09□□□□□ -0.15
PCDHB17P-201ENST00000539533 PNRC1Q12796 327 aaPredicted RBP14.09□□□□□ -0.15
PCDHB17P-201ENST00000539533 TRAT1Q6PIZ9 186 aa14.09□□□□□ -0.15
PCDHB17P-201ENST00000539533 OR51H1Q8NH63 302 aa14.09□□□□□ -0.15
PCDHB17P-201ENST00000539533 RAB40CQ96S21 281 aa14.09□□□□□ -0.15
PCDHB17P-201ENST00000539533 RSG1Q9BU20 258 aa14.09□□□□□ -0.15
PCDHB17P-201ENST00000539533 TMEM242Q9NWH2 141 aa14.09□□□□□ -0.15
PCDHB17P-201ENST00000539533 A0A1W2PPR1 153 aa14.09□□□□□ -0.15
PCDHB17P-201ENST00000539533 RND2P52198 227 aa14.09□□□□□ -0.15
PCDHB17P-201ENST00000539533 ZNF787Q6DD87 383 aa14.09□□□□□ -0.15
PCDHB17P-201ENST00000539533 FAM234AQ9H0X4 552 aa14.09□□□□□ -0.15
PCDHB17P-201ENST00000539533 EPG5Q9HCE0 2579 aa14.09□□□□□ -0.15
PCDHB17P-201ENST00000539533 FLNCQ14315 2725 aa14.08□□□□□ -0.15
PCDHB17P-201ENST00000539533 A8MWP6 167 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 FCN3O75636 299 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 SERPINE2P07093 398 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 SLC25A6P12236 298 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 COL8A2P25067 703 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 S100GP29377 79 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 LYPD2Q6UXB3 125 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 DRAM1Q8N682 238 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 TMEM68Q96MH6 324 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 OR6C3Q9NZP0 311 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 DSCAML1Q8TD84 2053 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 CLDN34H7C241 214 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 CGB3P0DN86 165 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 CGB7P0DN87 165 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 FGF7P21781 194 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 HTD2P86397 168 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 IZUMO4Q1ZYL8 232 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 LCN15Q6UWW0 184 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 TCF23Q7RTU1 214 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 SCGB1C1Q8TD33 95 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 RBM14Q96PK6 669 aaKnown RBP14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 OR2D2Q9H210 308 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 VSIRQ9H7M9 311 aa14.08□□□□□ -0.16
PCDHB17P-201ENST00000539533 TANC2Q9HCD6 1990 aa14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 NKX6-3A6NJ46 265 aa14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 JOSD1Q15040 202 aaPredicted RBP14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 ZNF726P1Q15940 193 aa14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 C17orf58Q2M2W7 97 aa14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 CALYQ9NYX4 217 aa14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 COL12A1Q99715 3063 aa14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 TNFRSF13BO14836 293 aaPredicted RBP14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 IGHV3-7P01780 117 aa14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 NUTF2P61970 127 aaKnown RBP14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 UTF1Q5T230 341 aa14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 Q6ZRM9 215 aa14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 ZNF664Q8N3J9 261 aa14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 MBD3L1Q8WWY6 194 aa14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 C5orf30Q96GV9 206 aa14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 NDUFAF3Q9BU61 184 aa14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 NCOR1P1Q9H4R4 102 aa14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 SLC25A10Q9UBX3 287 aaPredicted RBP14.07□□□□□ -0.16
PCDHB17P-201ENST00000539533 TGOLN2O43493 480 aa14.06□□□□□ -0.16
PCDHB17P-201ENST00000539533 GZMBP10144 247 aa14.06□□□□□ -0.16
PCDHB17P-201ENST00000539533 MDKP21741 143 aaPredicted RBP14.06□□□□□ -0.16
PCDHB17P-201ENST00000539533 FGF8P55075 233 aaPredicted RBP14.06□□□□□ -0.16
PCDHB17P-201ENST00000539533 LOXL3P58215 753 aa14.06□□□□□ -0.16
PCDHB17P-201ENST00000539533 SSX7Q7RTT5 188 aa14.06□□□□□ -0.16
PCDHB17P-201ENST00000539533 NOL4LQ96MY1 436 aaPredicted RBP14.06□□□□□ -0.16
PCDHB17P-201ENST00000539533 SDF2L1Q9HCN8 221 aa14.06□□□□□ -0.16
PCDHB17P-201ENST00000539533 CBLN4Q9NTU7 201 aa14.06□□□□□ -0.16
PCDHB17P-201ENST00000539533 GNG12Q9UBI6 72 aa14.06□□□□□ -0.16
PCDHB17P-201ENST00000539533 PITPNC1Q9UKF7 332 aa14.06□□□□□ -0.16
PCDHB17P-201ENST00000539533 PIGBOS1A0A0B4J2F0 54 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms