RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 IFITM2Q01629 132 aa1.66□□□□□ -2.14
PRKDC-205ENST00000535375 GNA12Q03113 381 aa1.66□□□□□ -2.14
PRKDC-205ENST00000535375 MIAQ16674 131 aa1.66□□□□□ -2.14
PRKDC-205ENST00000535375 C8orf74Q6P047 294 aa1.66□□□□□ -2.14
PRKDC-205ENST00000535375 FGF13Q92913 245 aa1.66□□□□□ -2.14
PRKDC-205ENST00000535375 TTTY13Q9BZ97 58 aa1.66□□□□□ -2.14
PRKDC-205ENST00000535375 VWDEQ8N2E2 1590 aa1.66□□□□□ -2.14
PRKDC-205ENST00000535375 PKD1L2Q7Z442 2459 aa1.65□□□□□ -2.14
PRKDC-205ENST00000535375 SORL1Q92673 2214 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 C2orf74A8MZ97 194 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 EEF1E1-BLOC1S5C9J1V9 151 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 KPNA3O00505 521 aaPredicted RBP1.65□□□□□ -2.15
PRKDC-205ENST00000535375 S1PR2O95136 353 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 UCHL1P09936 223 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 ALOX5APP20292 161 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 ALDH3A1P30838 453 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 CDKN2CP42773 168 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 SLCO1A2P46721 670 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 SULT1A1P50225 295 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 FXYD7P58549 80 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 LSM6P62312 80 aaKnown RBP1.65□□□□□ -2.15
PRKDC-205ENST00000535375 POLR2GP62487 172 aaKnown RBP eCLIP1.65□□□□□ -2.15
PRKDC-205ENST00000535375 FABP9Q0Z7S8 132 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 TPRXLQ17RH7 258 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 AGTRAPQ6RW13 159 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 LHFPL1Q86WI0 220 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 SLC35F6Q8N357 371 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 OR13C8Q8NGS7 320 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 XAGE1AQ9HD64 81 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 ANGPT4Q9Y264 503 aa1.65□□□□□ -2.15
PRKDC-205ENST00000535375 RBM7Q9Y580 266 aaKnown RBP1.65□□□□□ -2.15
PRKDC-205ENST00000535375 CACNA1GO43497 2377 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 GRIN2BQ13224 1484 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 A0A0G2JQZ4 141 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 A0A1B0GV50 99 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 NSA2O95478 260 aaKnown RBP1.64□□□□□ -2.15
PRKDC-205ENST00000535375 FAM228BP0C875 321 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 FGF6P10767 208 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 CEBPGP53567 150 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 SPCS3P61009 180 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 RANP62826 216 aaKnown RBP1.64□□□□□ -2.15
PRKDC-205ENST00000535375 CAV1Q03135 178 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 ZNF90Q03938 601 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 PABPC1L2AQ5JQF8 200 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 OR1L8Q8NGR8 309 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 OR2T4Q8NH00 348 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 ROPN1LQ96C74 230 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 CNBD2Q96M20 576 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 TTTY12Q9BZ98 90 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 VPS29Q9UBQ0 182 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 NUP160Q12769 1436 aa1.64□□□□□ -2.15
PRKDC-205ENST00000535375 NYNRINQ9P2P1 1898 aaKnown RBP1.63□□□□□ -2.15
PRKDC-205ENST00000535375 CLDN24A6NM45 220 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 CHP2O43745 196 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 LYPLA2O95372 231 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 PRB1P04280 392 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 TCRBP04435 133 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 ACOT6Q3I5F7 207 aaPredicted RBP1.63□□□□□ -2.15
PRKDC-205ENST00000535375 PCOTHQ58A44 107 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 SSX8Q7RTT4 187 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 DYNAPQ8N1N2 210 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 LRRC25Q8N386 305 aaPredicted RBP1.63□□□□□ -2.15
PRKDC-205ENST00000535375 CLDN22Q8N7P3 220 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 OR51D1Q8NGF3 324 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 ANKRD7Q92527 254 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 CCDC42Q96M95 316 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 PRAP1Q96NZ9 151 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 OR52E6Q96RD3 313 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 NDUFB11Q9NX14 153 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 RSL24D1Q9UHA3 163 aaKnown RBP1.63□□□□□ -2.15
PRKDC-205ENST00000535375 MYO9BQ13459 2157 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 SLX4Q8IY92 1834 aa1.63□□□□□ -2.15
PRKDC-205ENST00000535375 A0A0J9YW62 118 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 FNDC10F2Z333 226 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 GOLGA6L19H0YKK7 550 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 TXNDC9O14530 226 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 RPP14O95059 124 aaKnown RBP1.62□□□□□ -2.15
PRKDC-205ENST00000535375 RPS17P08708 135 aaKnown RBP1.62□□□□□ -2.15
PRKDC-205ENST00000535375 P0DMU3 169 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 FAM231AP0DMU4 169 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 FAM231CP0DMU5 169 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 HIST1H1TP22492 207 aaPredicted RBP1.62□□□□□ -2.15
PRKDC-205ENST00000535375 CA5AP35218 305 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 RPL30P62888 115 aaKnown RBP1.62□□□□□ -2.15
PRKDC-205ENST00000535375 CCL7P80098 99 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 AKR1C1Q04828 323 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 FADDQ13158 208 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 GUK1Q16774 197 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 HIST2H3PS2Q5TEC6 136 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 TRAPPC5Q8IUR0 188 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 OR5J2Q8NH18 312 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 OR4X1Q8NH49 305 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 TXNDC17Q9BRA2 123 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 HHLA3Q9XRX5 114 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 SLC22A13Q9Y226 551 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 ZFYVE9O95405 1425 aa1.62□□□□□ -2.15
PRKDC-205ENST00000535375 IGHV3-64A0A075B6Q5 118 aa1.61□□□□□ -2.15
PRKDC-205ENST00000535375 TNNC2P02585 160 aa1.61□□□□□ -2.15
PRKDC-205ENST00000535375 BPGMP07738 259 aa1.61□□□□□ -2.15
PRKDC-205ENST00000535375 SRP19P09132 144 aaKnown RBP1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 206 ms