RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 GADD45AP24522 165 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 PSMA1P25786 263 aaKnown RBP8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 PSMB6P28072 239 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 GABARAPL2P60520 117 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 ARFRP1Q13795 201 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 ARL6IP1Q15041 203 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 SPHARQ15513 63 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 IGSF11Q5DX21 431 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 PLAC9Q5JTB6 97 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 Q6ZS49 121 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 OR2C3Q8N628 320 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 RAB3CQ96E17 227 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 C5orf30Q96GV9 206 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 FYTTD1Q96QD9 318 aaKnown RBP8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 DCUN1D5Q9BTE7 237 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 OR51E2Q9H255 320 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 MLXQ9UH92 298 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 HECTD4Q9Y4D8 3996 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 PCLOQ9Y6V0 5065 aa8.2□□□□□ -1.1
SNRNP200-207ENST00000493271 LINC00473A8K010 186 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 SCAF4O95104 1147 aaKnown RBP8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 HLA-AP01891 365 aaKnown RBP8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 RPL27AP46776 148 aaKnown RBP8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 TCTAP57738 103 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 CLEC19AQ6UXS0 136 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 KCTD9Q7L273 389 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 RPP25LQ8N5L8 163 aaKnown RBP8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 ZNF645Q8N7E2 425 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 STPG3Q8N7X2 389 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 OR4S2Q8NH73 311 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 CACNG8Q8WXS5 425 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 UFD1Q92890 307 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 FAM3DQ96BQ1 224 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 RNF183Q96D59 192 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 CCDC140Q96MF4 163 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 OR2A7Q96R45 310 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 C5orf66Q9H5L9 145 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 SLC2A9Q9NRM0 540 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 FKBP14Q9NWM8 211 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 RAB22AQ9UL26 194 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 UFC1Q9Y3C8 167 aa8.19□□□□□ -1.1
SNRNP200-207ENST00000493271 TEX22C9J3V5 150 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 FCGR3BO75015 233 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 KBTBD11O94819 623 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 CTXN2P0C2S0 81 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 ZNF735P0CB33 412 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 EDN2P20800 178 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 ALDH3B2P48448 385 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 MED22Q15528 200 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 DEFB135Q30KP9 77 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 C2orf76Q3KRA6 126 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 C10orf55Q5SWW7 151 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 LAMTOR1Q6IAA8 161 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 BTNL8Q6UX41 500 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 H1FOOQ8IZA3 346 aaPredicted RBP8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 BPIFB6Q8NFQ5 453 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 TMEM167AQ8TBQ9 72 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 FBLIM1Q8WUP2 373 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 PHLDA1Q8WV24 401 aaPredicted RBP8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 FANCD2OSQ96PS1 177 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 AIFM2Q9BRQ8 373 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 MFFQ9GZY8 342 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 THYN1Q9P016 225 aa8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 AK6Q9Y3D8 172 aaKnown RBP8.18□□□□□ -1.1
SNRNP200-207ENST00000493271 HMX3A6NHT5 357 aa8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 MFNGO00587 321 aa8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 TSPAN4O14817 238 aa8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 CYB5BO43169 146 aa8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 DEFA4P12838 97 aa8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 CTRB1P17538 263 aa8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 TALDO1P37837 337 aa8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 CTRB2Q6GPI1 263 aa8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 LAIR2Q6ISS4 152 aa8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 ZNF773Q6PK81 442 aa8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 OR10R2Q8NGX6 335 aa8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 TSC22D3Q99576 134 aa8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 GFI1Q99684 422 aa8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 HSD17B10Q99714 261 aaKnown RBP8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 C6orf62Q9GZU0 229 aaPredicted RBP8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 KCNK7Q9Y2U2 307 aa8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 V9GY05 133 aa8.17□□□□□ -1.1
SNRNP200-207ENST00000493271 IGLV11-55A0A075B6I3 123 aa8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 MRPS14O60783 128 aaKnown RBP8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 HRASP01112 189 aa8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 CLEC3BP05452 202 aa8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 IL6RP08887 468 aaPredicted RBP8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 HIST1H1DP16402 221 aaKnown RBP8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 DTYMKP23919 212 aa8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 EWSR1Q01844 656 aaKnown RBP eCLIP8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 ZNF585BQ52M93 769 aa8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 LIPKQ5VXJ0 399 aa8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 GPR141Q7Z602 305 aa8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 PUSL1Q8N0Z8 303 aaKnown RBP8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 OR4A5Q8NH83 315 aa8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 GATAD1Q8WUU5 269 aa8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 DGCR14Q96DF8 476 aaKnown RBP8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 GALNT14Q96FL9 552 aa8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 ATP6V0BQ99437 205 aa8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 SRSF8Q9BRL6 282 aaKnown RBP8.16□□□□□ -1.1
SNRNP200-207ENST00000493271 SCN3BQ9NY72 215 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms