RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PVALBP20472 110 aaPredicted RBP-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 UBE2IP63279 158 aaKnown RBP-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 FABP5Q01469 135 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 GNA13Q14344 377 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 ZNF345Q14585 488 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 EBPQ15125 230 aaKnown RBP-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 RBM48Q5RL73 367 aaKnown RBP-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 GPHB5Q86YW7 130 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 LINC00471Q8N535 108 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 ZNF676Q8N7Q3 588 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 Q8N814 137 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 OR5AK3PQ8NH89 298 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 STOML3Q8TAV4 291 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 DYNC2LI1Q8TCX1 351 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 PATE1Q8WXA2 126 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 CCDC124Q96CT7 223 aaKnown RBP-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 BCL7BQ9BQE9 202 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 TMEM70Q9BUB7 260 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 METTL9Q9H1A3 318 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 KLK9Q9UKQ9 250 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 BAIAP2Q9UQB8 552 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 PCYT1BQ9Y5K3 369 aaPredicted RBP-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 ZNF462Q96JM2 2506 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 NSD1Q96L73 2696 aaPredicted RBP-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 MED12Q93074 2177 aa-0.08□□□□□ -2.42
CCDC93-209ENST00000488908 ANAPC1Q9H1A4 1944 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 GOLGA8QA0A0J9YX86 632 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 TMEM269A0A1B0GVZ9 245 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 GOLGA6L19H0YKK7 550 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 M0R2N4 97 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 HYPMO75409 117 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 ATP5G1P05496 136 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 CCL5P13501 91 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 F8A1P23610 371 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 BRS3P32247 399 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 ZNF93P35789 620 aaPredicted RBP-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 RPL30P62888 115 aaKnown RBP-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 TNNC1P63316 161 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 HPCAP84074 193 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 ZNF846Q147U1 533 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 RASSF6Q6ZTQ3 369 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 SPATA24Q86W54 205 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 RAB2BQ8WUD1 216 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 RSL24D1Q9UHA3 163 aaKnown RBP-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 HDGFL3Q9Y3E1 203 aa-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 TNRC6AQ8NDV7 1962 aaKnown RBP-0.09□□□□□ -2.42
CCDC93-209ENST00000488908 NUP153P49790 1475 aaKnown RBP-0.1□□□□□ -2.42
CCDC93-209ENST00000488908 SNRNP200O75643 2136 aaKnown RBP-0.1□□□□□ -2.42
CCDC93-209ENST00000488908 EML6Q6ZMW3 1958 aa-0.1□□□□□ -2.42
CCDC93-209ENST00000488908 TNCP24821 2201 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 TEX50A0A1B0GTY4 177 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 DAPL1A0PJW8 107 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 C5orf49A4QMS7 147 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 TRAPPC2LH3BP13 241 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 OR5F1O95221 314 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 TNFAIP8O95379 198 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 SULT1A3P0DMM9 295 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 SULT1A4P0DMN0 295 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 CCL2P13500 99 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 CD40LGP29965 261 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 MIPP30301 263 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 NUP62P37198 522 aaPredicted RBP-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 POLR2GP62487 172 aaKnown RBP eCLIP-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 MGAT3Q09327 533 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 AAED1Q7RTV5 226 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 TBC1D19Q8N5T2 526 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 ATP6V1C2Q8NEY4 427 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 OR10D3Q8NH80 312 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 ZNF418Q8TF45 676 aaPredicted RBP-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 MSANTD3Q96H12 275 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 SERPINB11Q96P15 392 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 CCL13Q99616 98 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 TMEM109Q9BVC6 243 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 HES4Q9HCC6 221 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 MRM2Q9UI43 246 aaKnown RBP-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 ENPP5Q9UJA9 477 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 CFAP45Q9UL16 551 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 TIMM22Q9Y584 194 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 HEATR5AQ86XA9 2040 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 LRPPRCP42704 1394 aaKnown RBP-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 KIF24Q5T7B8 1368 aa-0.1□□□□□ -2.43
CCDC93-209ENST00000488908 NCR3O14931 201 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 STX10O60499 249 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 APOMO95445 188 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 SLC35E2BP0CK96 405 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 HIST1H1CP16403 213 aaKnown RBP-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 CSN1S1P47710 185 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 CD151P48509 253 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 KCNJ3P48549 501 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 CIRBPQ14011 172 aaKnown RBP-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 SYCP1Q15431 976 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 C11orf40Q8WZ69 217 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 GNPNAT1Q96EK6 184 aaPredicted RBP-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 ERMAPQ96PL5 475 aaPredicted RBP-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 MROQ9BYG7 248 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 PRRG3Q9BZD7 231 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 NDEL1Q9GZM8 345 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 ASCL3Q9NQ33 180 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 CISHQ9NSE2 258 aa-0.11□□□□□ -2.43
CCDC93-209ENST00000488908 PRELID1Q9Y255 219 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms