RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 CENPNQ96H22 339 aaPredicted RBP6.82□□□□□ -1.32
PTPN7-213ENST00000486116 CXorf58Q96LI9 332 aa6.82□□□□□ -1.32
PTPN7-213ENST00000486116 FAAP24Q9BTP7 215 aa6.82□□□□□ -1.32
PTPN7-213ENST00000486116 SDHAF2Q9NX18 166 aa6.82□□□□□ -1.32
PTPN7-213ENST00000486116 DPPA5A6NC42 116 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 CRTAPO75718 401 aaPredicted RBP6.81□□□□□ -1.32
PTPN7-213ENST00000486116 CRYZL1O95825 349 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 HIST1H1BP16401 226 aaKnown RBP6.81□□□□□ -1.32
PTPN7-213ENST00000486116 IGFBP3P17936 291 aaPredicted RBP6.81□□□□□ -1.32
PTPN7-213ENST00000486116 DEFB131AP59861 70 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 SNRPGP62308 76 aaKnown RBP6.81□□□□□ -1.32
PTPN7-213ENST00000486116 IRF3Q14653 427 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 FAM90A2PQ658T7 463 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 KDM4DQ6B0I6 523 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 ZFP1Q6P2D0 407 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 ZNF66Q6ZN08 573 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 C6orf201Q7Z4U5 140 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 STHQ8IWL8 128 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 MMD2Q8IY49 270 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 FAM24BQ8N5W8 94 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 ZNF414Q96IQ9 312 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 OR2A7Q96R45 310 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 C20orf24Q9BUV8 137 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 KRTAP1-5Q9BYS1 174 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 GABARAPL1Q9H0R8 117 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 TMEM14BQ9NUH8 114 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 SMPXQ9UHP9 88 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 TMED3Q9Y3Q3 217 aa6.81□□□□□ -1.32
PTPN7-213ENST00000486116 IGKV1-6A0A0C4DH72 117 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 FAM229AH3BQW9 127 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 K7EMT4 169 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 CHEK1O14757 476 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 CREBL2O60519 120 aaPredicted RBP6.8□□□□□ -1.32
PTPN7-213ENST00000486116 REG1AP05451 166 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 CD2P06729 351 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 ZNF735P0CB33 412 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 SPP1P10451 314 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 HLA-DRB3P79483 266 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 AWAT2Q6E213 333 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 TMEM88Q6PEY1 159 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 MOB1BQ7L9L4 216 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 RFKQ969G6 155 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 RHPN1-AS1Q9BWJ2 59 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 OR2D2Q9H210 308 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 CHMP1AQ9HD42 196 aaPredicted RBP6.8□□□□□ -1.32
PTPN7-213ENST00000486116 RDH8Q9NYR8 311 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 AASSQ9UDR5 926 aa6.8□□□□□ -1.32
PTPN7-213ENST00000486116 TRBV5-7A0A0A0MS05 114 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 IGHV3-49A0A0A0MS15 119 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 IGHV7-4-1A0A0J9YVY3 117 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 OR2T8A6NH00 312 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 NDUFA4O00483 81 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 DHFRP00374 187 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 RRASP10301 218 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 HTN3P15516 51 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 RPL27AP46776 148 aaKnown RBP6.79□□□□□ -1.32
PTPN7-213ENST00000486116 GTF2A1P52655 376 aaPredicted RBP6.79□□□□□ -1.32
PTPN7-213ENST00000486116 KRTAP10-1P60331 282 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 AMIGO2Q86SJ2 522 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 LHFPL3Q86UP9 236 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 SYS1Q8N2H4 156 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 JAGN1Q8N5M9 183 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 ACBD7Q8N6N7 88 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 OR8J1Q8NGP2 316 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 OSR1Q8TAX0 266 aaPredicted RBP6.79□□□□□ -1.32
PTPN7-213ENST00000486116 GPR148Q8TDV2 347 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 GIMAP1Q8WWP7 306 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 ATG101Q9BSB4 218 aa6.79□□□□□ -1.32
PTPN7-213ENST00000486116 HDHD3Q9BSH5 251 aaPredicted RBP6.79□□□□□ -1.32
PTPN7-213ENST00000486116 LRP2P98164 4655 aa6.78□□□□□ -1.32
PTPN7-213ENST00000486116 DNAH8Q96JB1 4490 aa6.78□□□□□ -1.32
PTPN7-213ENST00000486116 TRAV8-7A0A075B6U6 113 aa6.78□□□□□ -1.32
PTPN7-213ENST00000486116 TRBV6-6A0A0A6YYG2 114 aa6.78□□□□□ -1.32
PTPN7-213ENST00000486116 CGB1A6NKQ9 187 aa6.78□□□□□ -1.32
PTPN7-213ENST00000486116 LINC00473A8K010 186 aa6.78□□□□□ -1.32
PTPN7-213ENST00000486116 DFFBO76075 338 aa6.78□□□□□ -1.32
PTPN7-213ENST00000486116 SPART-AS1P0CW21 52 aa6.78□□□□□ -1.32
PTPN7-213ENST00000486116 PTBP1P26599 531 aaKnown RBP eCLIP6.78□□□□□ -1.325e-9■■■■□ 20.4
PTPN7-213ENST00000486116 POLR2IP36954 125 aaKnown RBP6.78□□□□□ -1.32
PTPN7-213ENST00000486116 HAMPP81172 84 aa6.78□□□□□ -1.32
PTPN7-213ENST00000486116 VKORC1L1Q8N0U8 176 aa6.78□□□□□ -1.32
PTPN7-213ENST00000486116 TMEM116Q8NCL8 245 aa6.78□□□□□ -1.32
PTPN7-213ENST00000486116 TRUB1Q8WWH5 349 aaKnown RBP6.78□□□□□ -1.32
PTPN7-213ENST00000486116 PYDC1Q8WXC3 89 aa6.78□□□□□ -1.32
PTPN7-213ENST00000486116 NEDD4LQ96PU5 975 aa6.78□□□□□ -1.32
PTPN7-213ENST00000486116 SMPD3Q9NY59 655 aaPredicted RBP6.78□□□□□ -1.32
PTPN7-213ENST00000486116 OAZ3Q9UMX2 235 aa6.78□□□□□ -1.32
PTPN7-213ENST00000486116 KNCNA6PVL3 124 aa6.77□□□□□ -1.33
PTPN7-213ENST00000486116 C15orf62A8K5M9 175 aa6.77□□□□□ -1.33
PTPN7-213ENST00000486116 DEFA4P12838 97 aa6.77□□□□□ -1.33
PTPN7-213ENST00000486116 DUTP33316 252 aaKnown RBP6.77□□□□□ -1.33
PTPN7-213ENST00000486116 DLK1P80370 383 aa6.77□□□□□ -1.33
PTPN7-213ENST00000486116 ICAM4Q14773 271 aa6.77□□□□□ -1.33
PTPN7-213ENST00000486116 XAF1Q6GPH4 301 aa6.77□□□□□ -1.33
PTPN7-213ENST00000486116 OR6M1Q8NGM8 313 aa6.77□□□□□ -1.33
PTPN7-213ENST00000486116 GABARAPL3Q9BY60 117 aa6.77□□□□□ -1.33
PTPN7-213ENST00000486116 IMPAD1Q9NX62 359 aa6.77□□□□□ -1.33
PTPN7-213ENST00000486116 EXOGQ9Y2C4 368 aaKnown RBP6.77□□□□□ -1.33
PTPN7-213ENST00000486116 ORC6Q9Y5N6 252 aa6.77□□□□□ -1.33
PTPN7-213ENST00000486116 IGHV3OR16-13A0A075B7E8 117 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms