RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 TMEM167AQ8TBQ9 72 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 MOB3AQ96BX8 217 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 SPIN2AQ99865 258 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 SPIN2BQ9BPZ2 258 aa9.92□□□□□ -0.82
HDAC1-209ENST00000484305 A0A1B0GW64 132 aa9.91□□□□□ -0.82
HDAC1-209ENST00000484305 HMX3A6NHT5 357 aa9.91□□□□□ -0.82
HDAC1-209ENST00000484305 TEX22C9J3V5 150 aa9.91□□□□□ -0.82
HDAC1-209ENST00000484305 SAP30O75446 220 aa9.91□□□□□ -0.82
HDAC1-209ENST00000484305 HRASP01112 189 aa9.91□□□□□ -0.82
HDAC1-209ENST00000484305 IL6RP08887 468 aaPredicted RBP9.91□□□□□ -0.82
HDAC1-209ENST00000484305 HRH1P35367 487 aa9.91□□□□□ -0.82
HDAC1-209ENST00000484305 ZNF45Q02386 682 aa9.91□□□□□ -0.82
HDAC1-209ENST00000484305 CATR1Q13166 79 aa9.91□□□□□ -0.82
HDAC1-209ENST00000484305 ACSM6Q6P461 480 aa9.91□□□□□ -0.82
HDAC1-209ENST00000484305 MZT2AQ6P582 158 aa9.91□□□□□ -0.82
HDAC1-209ENST00000484305 GPR141Q7Z602 305 aa9.91□□□□□ -0.82
HDAC1-209ENST00000484305 ZNF429Q86V71 674 aa9.91□□□□□ -0.82
HDAC1-209ENST00000484305 TTC9CQ8N5M4 171 aa9.91□□□□□ -0.82
HDAC1-209ENST00000484305 OR51H1Q8NH63 302 aa9.91□□□□□ -0.82
HDAC1-209ENST00000484305 RANGRFQ9HD47 186 aaPredicted RBP9.91□□□□□ -0.82
HDAC1-209ENST00000484305 ADAM30Q9UKF2 790 aa9.91□□□□□ -0.82
HDAC1-209ENST00000484305 TRBV9A0A0B4J1U6 114 aa9.9□□□□□ -0.82
HDAC1-209ENST00000484305 FAM25AB3EWG3 89 aa9.9□□□□□ -0.82
HDAC1-209ENST00000484305 FAM25CB3EWG5 89 aa9.9□□□□□ -0.82
HDAC1-209ENST00000484305 FAM25GB3EWG6 89 aa9.9□□□□□ -0.82
HDAC1-209ENST00000484305 RBFOX2O43251 390 aaKnown RBP eCLIP9.9□□□□□ -0.82
HDAC1-209ENST00000484305 TRBV12-3P01733 135 aa9.9□□□□□ -0.82
HDAC1-209ENST00000484305 MYOD1P15172 320 aa9.9□□□□□ -0.82
HDAC1-209ENST00000484305 ZNF182P17025 639 aaPredicted RBP9.9□□□□□ -0.82
HDAC1-209ENST00000484305 MAS1LP35410 378 aa9.9□□□□□ -0.82
HDAC1-209ENST00000484305 AADACL3Q5VUY0 350 aa9.9□□□□□ -0.82
HDAC1-209ENST00000484305 OR4A47Q6IF82 309 aa9.9□□□□□ -0.82
HDAC1-209ENST00000484305 ZNF343Q6P1L6 599 aa9.9□□□□□ -0.82
HDAC1-209ENST00000484305 OR6F1Q8NGZ6 308 aa9.9□□□□□ -0.82
HDAC1-209ENST00000484305 USMG5Q96IX5 58 aa9.9□□□□□ -0.82
HDAC1-209ENST00000484305 FYTTD1Q96QD9 318 aaKnown RBP9.9□□□□□ -0.82
HDAC1-209ENST00000484305 FXYD6Q9H0Q3 95 aa9.9□□□□□ -0.82
HDAC1-209ENST00000484305 SCPEP1Q9HB40 452 aa9.9□□□□□ -0.82
HDAC1-209ENST00000484305 AKIP1Q9NQ31 210 aa9.9□□□□□ -0.82
HDAC1-209ENST00000484305 ZNF256Q9Y2P7 627 aaPredicted RBP9.9□□□□□ -0.82
HDAC1-209ENST00000484305 LSM4Q9Y4Z0 139 aaKnown RBP9.9□□□□□ -0.82
HDAC1-209ENST00000484305 COL7A1Q02388 2944 aa9.89□□□□□ -0.83
HDAC1-209ENST00000484305 TRAV3A0A0B4J244 114 aa9.89□□□□□ -0.83
HDAC1-209ENST00000484305 PGLYRP1O75594 196 aaPredicted RBP9.89□□□□□ -0.83
HDAC1-209ENST00000484305 HPRT1P00492 218 aa9.89□□□□□ -0.83
HDAC1-209ENST00000484305 RLN1P04808 185 aa9.89□□□□□ -0.83
HDAC1-209ENST00000484305 ZNF735P0CB33 412 aa9.89□□□□□ -0.83
HDAC1-209ENST00000484305 RPL27AP46776 148 aaKnown RBP9.89□□□□□ -0.83
HDAC1-209ENST00000484305 TAS2R31P59538 309 aa9.89□□□□□ -0.83
HDAC1-209ENST00000484305 RPL8P62917 257 aaKnown RBP9.89□□□□□ -0.83
HDAC1-209ENST00000484305 RHOGP84095 191 aa9.89□□□□□ -0.83
HDAC1-209ENST00000484305 SPCS2Q15005 226 aa9.89□□□□□ -0.83
HDAC1-209ENST00000484305 C19orf35Q6ZS72 473 aa9.89□□□□□ -0.83
HDAC1-209ENST00000484305 AP3S1Q92572 193 aa9.89□□□□□ -0.83
HDAC1-209ENST00000484305 BORCS5Q969J3 196 aa9.89□□□□□ -0.83
HDAC1-209ENST00000484305 AIFM2Q9BRQ8 373 aa9.89□□□□□ -0.83
HDAC1-209ENST00000484305 HRASLSQ9HDD0 168 aa9.89□□□□□ -0.83
HDAC1-209ENST00000484305 SLC2A9Q9NRM0 540 aa9.89□□□□□ -0.83
HDAC1-209ENST00000484305 BET1LQ9NYM9 111 aa9.89□□□□□ -0.83
HDAC1-209ENST00000484305 PEF1Q9UBV8 284 aaKnown RBP9.89□□□□□ -0.83
HDAC1-209ENST00000484305 CGB1A6NKQ9 187 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 FAM223BA6NKX1 122 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 S1PR2O95136 353 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 LY86O95711 162 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 AREGP15514 252 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 NQO2P16083 231 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 SPNP16150 400 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 HLA-GP17693 338 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 ZP3P21754 424 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 RCVRNP35243 200 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 ATP5G2Q06055 141 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 KLF5Q13887 457 aaPredicted RBP9.88□□□□□ -0.83
HDAC1-209ENST00000484305 POU2AF1Q16633 256 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 RNASE12Q5GAN4 147 aaKnown RBP9.88□□□□□ -0.83
HDAC1-209ENST00000484305 FAM223AQ8IWN6 122 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 OR4A5Q8NH83 315 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 CD300LFQ8TDQ1 290 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 B9D2Q9BPU9 175 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 PLEKHA2Q9HB19 425 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 EXTL2Q9UBQ6 330 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 KLK11Q9UBX7 282 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 ZNF257Q9Y2Q1 563 aa9.88□□□□□ -0.83
HDAC1-209ENST00000484305 NPIPB5A8MRT5 1133 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 M0QYG6 137 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 GPR31O00270 319 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 UPK2O00526 184 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 OR2J3O76001 311 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 RPA2P15927 270 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 F2RP25116 425 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 TSPAN5P62079 268 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 CD69Q07108 199 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 DCTN2Q13561 401 aaKnown RBP9.87□□□□□ -0.83
HDAC1-209ENST00000484305 EXOSC2Q13868 293 aaKnown RBP9.87□□□□□ -0.83
HDAC1-209ENST00000484305 HAPLN4Q86UW8 402 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 SLC25A42Q86VD7 318 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 CLVS1Q8IUQ0 354 aaPredicted RBP9.87□□□□□ -0.83
HDAC1-209ENST00000484305 CMTM1Q8IZ96 169 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 NECAP1Q8NC96 275 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 DMBX1Q8NFW5 382 aa9.87□□□□□ -0.83
HDAC1-209ENST00000484305 DGCR14Q96DF8 476 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms