RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 GGTLC1Q9BX51 225 aa4.98□□□□□ -1.61
SMARCE1-208ENST00000474246 DNAJC27Q9NZQ0 273 aa4.98□□□□□ -1.61
SMARCE1-208ENST00000474246 IER3IP1Q9Y5U9 82 aa4.98□□□□□ -1.61
SMARCE1-208ENST00000474246 FLVCR1Q9Y5Y0 555 aa4.98□□□□□ -1.61
SMARCE1-208ENST00000474246 CRYBG3Q68DQ2 2970 aa4.98□□□□□ -1.61
SMARCE1-208ENST00000474246 FOCADQ5VW36 1801 aa4.98□□□□□ -1.61
SMARCE1-208ENST00000474246 A0A0D9SG52 128 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 DHRS12A0PJE2 317 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 BCL2L11O43521 198 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 FGF1P05230 155 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 ZNF728P0DKX0 622 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 LIFP15018 202 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 CXCL2P19875 107 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 FABP5Q01469 135 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 SLC25A11Q02978 314 aaKnown RBP4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 HMGN3Q15651 99 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 HRCT1Q6UXD1 115 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 Q6ZS52 159 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 C8orf46Q8TAG6 207 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 ATG5Q9H1Y0 275 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 SERTAD4Q9NUC0 356 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 POMPQ9Y244 141 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 GOLGA4Q13439 2230 aaKnown RBP4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 TMED7-TICAM2A0A0A6YYA0 188 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 A0A0B4J2A0 478 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 C7orf71A4D174 169 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 RIIAD1A6NNX1 92 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 PSPNO60542 156 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 PLA2G1BP04054 148 aaKnown RBP4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 PSMB9P28065 219 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 APOC4P55056 127 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 FOXA1P55317 472 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 PRDX4Q13162 271 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 RAB6CQ53S08 254 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 TEDDM1Q5T9Z0 273 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 IGFL2Q6UWQ7 119 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 ZNF550Q7Z398 422 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 TMEM139Q8IV31 216 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 OR2M3Q8NG83 312 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 PSMF1Q92530 271 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 FMC1Q96HJ9 113 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 PKMYT1Q99640 499 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 DPY30Q9C005 99 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 RAB6CQ9H0N0 254 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 JPT2Q9H910 190 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 UBE2TQ9NPD8 197 aaPredicted RBP4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 SHPKQ9UHJ6 478 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 RIMS3Q9UJD0 308 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 MRPS16Q9Y3D3 137 aaKnown RBP4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 MGAQ8IWI9 3026 aa4.97□□□□□ -1.61
SMARCE1-208ENST00000474246 LRRK1Q38SD2 2015 aa4.96□□□□□ -1.61
SMARCE1-208ENST00000474246 MYH7BA7E2Y1 1941 aa4.96□□□□□ -1.61
SMARCE1-208ENST00000474246 TEX50A0A1B0GTY4 177 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 MYBPHLA2RUH7 354 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 BBIP1A8MTZ0 92 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 HOXA3O43365 443 aaPredicted RBP4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 APOHP02749 345 aaPredicted RBP4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 SOD3P08294 240 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 SPINK8P0C7L1 97 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 ZNF92Q03936 586 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 TMEM183BQ1AE95 376 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 MEIG1Q5JSS6 88 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 FAM201AQ5SY85 155 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 TSPO2Q5TGU0 170 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 EXOC3-AS1Q8N2X6 119 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 OLIG1Q8TAK6 271 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 SRSF12Q8WXF0 261 aaKnown RBP4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 PLEKHF1Q96S99 279 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 VAMP8Q9BV40 100 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 C19orf24Q9BVV8 132 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 SPANXDQ9BXN6 97 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 SCAND2PQ9GZW5 306 aaPredicted RBP4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 WDR13Q9H1Z4 485 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 IL36AQ9UHA7 158 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 RNF11Q9Y3C5 154 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 ZC3H12DA2A288 527 aaKnown RBP4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 FNDC10F2Z333 226 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 GABARAPO95166 117 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 CXorf1O96002 111 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 CFDP00746 253 aaPredicted RBP4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 LGALS2P05162 132 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 CD1DP15813 335 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 TAF6P49848 677 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 SLC35A1P78382 337 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 VAX1Q5SQQ9 334 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 CNIH2Q6PI25 160 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 LRP11Q86VZ4 500 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 CT55Q8WUE5 264 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 TM2D1Q9BX74 207 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 WDR61Q9GZS3 305 aaKnown RBP4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 BANF2Q9H503 90 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 TMEM45AQ9NWC5 275 aa4.96□□□□□ -1.62
SMARCE1-208ENST00000474246 LOC107984640A0A0U1RRK4 108 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 P01737 135 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 IGKV5-2P06315 115 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 IGLC6P0CF74 106 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 NHLRC4P0CG21 123 aaPredicted RBP4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 FGF6P10767 208 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 CTRLP40313 264 aa4.95□□□□□ -1.62
SMARCE1-208ENST00000474246 SUB1P53999 127 aaKnown RBP eCLIP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms