RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 FCN1O00602 326 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 SNAPC5O75971 98 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 KRASP01116 189 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 VDAC1P21796 283 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 RPL8P62917 257 aaKnown RBP9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 FXYD3Q14802 87 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 OR4A47Q6IF82 309 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 Q6ZS46 218 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 SLC25A42Q86VD7 318 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 STPG2Q8N412 459 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 SGMS2Q8NHU3 365 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 WFDC12Q8WWY7 111 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 TMEM56Q96MV1 263 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 SPIN2AQ99865 258 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 SPIN2BQ9BPZ2 258 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 SRSF8Q9BRL6 282 aaKnown RBP9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 PALMDQ9NP74 551 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 TMEM56-RWDD3S4R434 201 aa9.97□□□□□ -0.81
SPTLC1-204ENST00000469778 FAM240BA0A1B0GVZ2 78 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 DUXBA0A1W2PPF3 345 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 PSMB11A5LHX3 300 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 UPK2O00526 184 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 S1PR2O95136 353 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 BRI3O95415 125 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 CA2P00918 260 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 AKR1C4P17516 323 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 HLA-GP17693 338 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 CCR6P51684 374 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 TRIM16LQ309B1 348 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 THOC7Q6I9Y2 204 aaKnown RBP9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 TEX38Q6PEX7 206 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 H2BFWTQ7Z2G1 175 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 HSD17B13Q7Z5P4 300 aaPredicted RBP9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 TMED4Q7Z7H5 227 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 KLHDC1Q8N7A1 406 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 WIPF2Q8TF74 440 aaPredicted RBP9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 GLYATL2Q8WU03 294 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 ARPC1AQ92747 370 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 RBPMSQ93062 196 aaKnown RBP9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 RRNAD1Q96FB5 475 aaKnown RBP9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 TP53RKQ96S44 253 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 HSPB9Q9BQS6 159 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 COMMD5Q9GZQ3 224 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 ZNF430Q9H8G1 570 aaPredicted RBP9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 PRNDQ9UKY0 176 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 NUBP2Q9Y5Y2 271 aa9.96□□□□□ -0.82
SPTLC1-204ENST00000469778 TRAV41A0A0B4J266 112 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 HAX1O00165 279 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 TCRBP04435 133 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 OR5AC1P0C628 307 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 BTCP35070 178 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 RAB25P57735 213 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 ZNF695Q8IW36 515 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 MRPL41Q8IXM3 137 aaKnown RBP9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 VKORC1L1Q8N0U8 176 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 LGI3Q8N145 548 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 LRTM2Q8N967 370 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 MINDY2Q8NBR6 621 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 ADAD2Q8NCV1 583 aaKnown RBP9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 DUSP18Q8NEJ0 188 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 OR5AU1Q8NGC0 362 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 OR4X2Q8NGF9 303 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 OR5M8Q8NGP6 311 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 OR5B3Q8NH48 314 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 LSM10Q969L4 123 aaKnown RBP9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 SEC22AQ96IW7 307 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 ZFP57Q9NU63 452 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 TMEM140Q9NV12 185 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 ZNF257Q9Y2Q1 563 aa9.95□□□□□ -0.82
SPTLC1-204ENST00000469778 A0A0B4J2A0 478 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 SH2D7A6NKC9 451 aaPredicted RBP9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 LINC01548A6NM66 108 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 H3BUA1 57 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 IGHG4P01861 327 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 OPN1MWP04001 364 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 ELANEP08246 267 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 OPN1MW2P0DN77 364 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 OPN1MW3P0DN78 364 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 MECP2P51608 486 aaKnown RBP9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 PJVKQ0ZLH3 352 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 FOXE3Q13461 319 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 TNXAQ16473 311 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 SP6Q3SY56 376 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 RNF152Q8N8N0 203 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 OR4A16Q8NH70 328 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 ABHD5Q8WTS1 349 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 TMEM230Q96A57 120 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 CLCC1Q96S66 551 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 CITED1Q99966 193 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 PARP11Q9NR21 331 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 SHPKQ9UHJ6 478 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 TBC1D24Q9ULP9 559 aa9.94□□□□□ -0.82
SPTLC1-204ENST00000469778 MSGN1A6NI15 193 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 ARPC1BO15143 372 aaKnown RBP9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 ATP6V0E1O15342 81 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 FBXO24O75426 580 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 SFT2D2O95562 160 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 IGKV1-39P01597 117 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 IGKV1D-39P04432 117 aa9.93□□□□□ -0.82
SPTLC1-204ENST00000469778 EGR2P11161 476 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms