RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 TPSG1Q9NRR2 321 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 NUBP2Q9Y5Y2 271 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 TMEM56-RWDD3S4R434 201 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 AP4M1O00189 453 aa12.64□□□□□ -0.39
GPC1-207ENST00000466624 FCN1O00602 326 aa12.64□□□□□ -0.39
GPC1-207ENST00000466624 CA2P00918 260 aa12.64□□□□□ -0.39
GPC1-207ENST00000466624 IGF1P05019 195 aa12.64□□□□□ -0.39
GPC1-207ENST00000466624 MDKP21741 143 aaPredicted RBP12.64□□□□□ -0.39
GPC1-207ENST00000466624 MAS1LP35410 378 aa12.64□□□□□ -0.39
GPC1-207ENST00000466624 MECP2P51608 486 aaKnown RBP12.64□□□□□ -0.39
GPC1-207ENST00000466624 CRIP2P52943 208 aaPredicted RBP12.64□□□□□ -0.39
GPC1-207ENST00000466624 CX3CL1P78423 397 aa12.64□□□□□ -0.39
GPC1-207ENST00000466624 SRPXP78539 464 aa12.64□□□□□ -0.39
GPC1-207ENST00000466624 TMEM187Q14656 261 aa12.64□□□□□ -0.39
GPC1-207ENST00000466624 TRIM16LQ309B1 348 aa12.64□□□□□ -0.39
GPC1-207ENST00000466624 SP6Q3SY56 376 aa12.64□□□□□ -0.39
GPC1-207ENST00000466624 FOXRED2Q8IWF2 684 aa12.64□□□□□ -0.39
GPC1-207ENST00000466624 DMBX1Q8NFW5 382 aa12.64□□□□□ -0.39
GPC1-207ENST00000466624 OR51J1Q9H342 316 aa12.64□□□□□ -0.39
GPC1-207ENST00000466624 TMEM140Q9NV12 185 aa12.64□□□□□ -0.39
GPC1-207ENST00000466624 FLVCR2Q9UPI3 526 aa12.64□□□□□ -0.39
GPC1-207ENST00000466624 FBN1P35555 2871 aaKnown RBP12.64□□□□□ -0.39
GPC1-207ENST00000466624 SFT2D2O95562 160 aa12.63□□□□□ -0.39
GPC1-207ENST00000466624 KRASP01116 189 aa12.63□□□□□ -0.39
GPC1-207ENST00000466624 G6PCP35575 357 aa12.63□□□□□ -0.39
GPC1-207ENST00000466624 PROK1P58294 105 aa12.63□□□□□ -0.39
GPC1-207ENST00000466624 AWAT1Q58HT5 328 aa12.63□□□□□ -0.39
GPC1-207ENST00000466624 SSX9Q7RTT3 188 aa12.63□□□□□ -0.39
GPC1-207ENST00000466624 RBPMSQ93062 196 aaKnown RBP12.63□□□□□ -0.39
GPC1-207ENST00000466624 CLCC1Q96S66 551 aa12.63□□□□□ -0.39
GPC1-207ENST00000466624 WNT10AQ9GZT5 417 aa12.63□□□□□ -0.39
GPC1-207ENST00000466624 ZNF430Q9H8G1 570 aaPredicted RBP12.63□□□□□ -0.39
GPC1-207ENST00000466624 NUDT15Q9NV35 164 aa12.63□□□□□ -0.39
GPC1-207ENST00000466624 RNF114Q9Y508 228 aa12.63□□□□□ -0.39
GPC1-207ENST00000466624 UPK2O00526 184 aa12.62□□□□□ -0.39
GPC1-207ENST00000466624 OR4E1P0C645 316 aa12.62□□□□□ -0.39
GPC1-207ENST00000466624 VAMP1P23763 118 aa12.62□□□□□ -0.39
GPC1-207ENST00000466624 RPL8P62917 257 aaKnown RBP12.62□□□□□ -0.39
GPC1-207ENST00000466624 SSBP2P81877 361 aaPredicted RBP12.62□□□□□ -0.39
GPC1-207ENST00000466624 PJVKQ0ZLH3 352 aa12.62□□□□□ -0.39
GPC1-207ENST00000466624 PPP1R1AQ13522 171 aa12.62□□□□□ -0.39
GPC1-207ENST00000466624 DCTN2Q13561 401 aaKnown RBP12.62□□□□□ -0.39
GPC1-207ENST00000466624 NRARPQ7Z6K4 114 aa12.62□□□□□ -0.39
GPC1-207ENST00000466624 FAM219AQ8IW50 185 aa12.62□□□□□ -0.39
GPC1-207ENST00000466624 LRTM2Q8N967 370 aa12.62□□□□□ -0.39
GPC1-207ENST00000466624 LHFPL5Q8TAF8 219 aa12.62□□□□□ -0.39
GPC1-207ENST00000466624 CHPT1Q8WUD6 406 aa12.62□□□□□ -0.39
GPC1-207ENST00000466624 GON7Q9BXV9 100 aa12.62□□□□□ -0.39
GPC1-207ENST00000466624 DUXBA0A1W2PPF3 345 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 LINC01548A6NM66 108 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 ATP6V0E1O15342 81 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 ACTL6BO94805 426 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 H2AFB2P0C5Z0 115 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 P0C879 139 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 ANXA7P20073 488 aaKnown RBP12.61□□□□□ -0.39
GPC1-207ENST00000466624 AKR1C2P52895 323 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 NDPQ00604 133 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 FXYD3Q14802 87 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 TMEM95Q3KNT9 176 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 TMEM268Q5VZI3 342 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 H2BFWTQ7Z2G1 175 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 ZNF695Q8IW36 515 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 SELENOHQ8IZQ5 122 aaKnown RBP12.61□□□□□ -0.39
GPC1-207ENST00000466624 LGI3Q8N145 548 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 STPG2Q8N412 459 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 SGMS2Q8NHU3 365 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 WIPF2Q8TF74 440 aaPredicted RBP12.61□□□□□ -0.39
GPC1-207ENST00000466624 ARPC1AQ92747 370 aa12.61□□□□□ -0.39
GPC1-207ENST00000466624 COL6A5A8TX70 2615 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 TRAV6A0A075B6T7 132 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 A0A0B4J2A0 478 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 C9orf170A2RU37 121 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 CNIH1O95406 144 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 PTTG1O95997 202 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 IGKV1-5P01602 117 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 HLA-AP01891 365 aaKnown RBP12.6□□□□□ -0.39
GPC1-207ENST00000466624 HLA-GP17693 338 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 DHRS2Q13268 280 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 TNXAQ16473 311 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 PLET1Q6UQ28 207 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 LYG2Q86SG7 212 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 LSM10Q969L4 123 aaKnown RBP12.6□□□□□ -0.39
GPC1-207ENST00000466624 RRNAD1Q96FB5 475 aaKnown RBP12.6□□□□□ -0.39
GPC1-207ENST00000466624 TMEM68Q96MH6 324 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 PARP11Q9NR21 331 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 SHPKQ9UHJ6 478 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 PRNDQ9UKY0 176 aa12.6□□□□□ -0.39
GPC1-207ENST00000466624 TET2Q6N021 2002 aaPredicted RBP12.59□□□□□ -0.39
GPC1-207ENST00000466624 TRAV3A0A0B4J244 114 aa12.59□□□□□ -0.39
GPC1-207ENST00000466624 SNAPC5O75971 98 aa12.59□□□□□ -0.39
GPC1-207ENST00000466624 DUS4LO95620 317 aaKnown RBP12.59□□□□□ -0.39
GPC1-207ENST00000466624 OR9G9P0C7N8 305 aa12.59□□□□□ -0.39
GPC1-207ENST00000466624 EGR2P11161 476 aaPredicted RBP12.59□□□□□ -0.39
GPC1-207ENST00000466624 VDAC1P21796 283 aa12.59□□□□□ -0.39
GPC1-207ENST00000466624 GNB1P62873 340 aa12.59□□□□□ -0.39
GPC1-207ENST00000466624 TMEM267Q0VDI3 215 aaPredicted RBP12.59□□□□□ -0.39
GPC1-207ENST00000466624 C4orf46Q504U0 113 aa12.59□□□□□ -0.39
GPC1-207ENST00000466624 AKIRIN2Q53H80 203 aa12.59□□□□□ -0.39
GPC1-207ENST00000466624 C19orf54Q5BKX5 351 aa12.59□□□□□ -0.39
GPC1-207ENST00000466624 KLHDC1Q8N7A1 406 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms