RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 KBTBD11O94819 623 aa10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 SCAF4O95104 1147 aaKnown RBP10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 HLA-AP01891 365 aaKnown RBP10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 ZNF735P0CB33 412 aa10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 RPL27AP46776 148 aaKnown RBP10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 ARL6IP1Q15041 203 aa10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 MED22Q15528 200 aa10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 BTNL8Q6UX41 500 aa10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 CLEC19AQ6UXS0 136 aa10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 KCTD9Q7L273 389 aa10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 ZNF645Q8N7E2 425 aa10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 OR4S2Q8NH73 311 aa10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 TMEM167AQ8TBQ9 72 aa10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 CACNG8Q8WXS5 425 aa10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 MFFQ9GZY8 342 aa10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 KMT2AQ03164 3969 aa10.63□□□□□ -0.71
LYSMD3-202ENST00000453259 CTXN2P0C2S0 81 aa10.62□□□□□ -0.71
LYSMD3-202ENST00000453259 EDN2P20800 178 aa10.62□□□□□ -0.71
LYSMD3-202ENST00000453259 DEFB135Q30KP9 77 aa10.62□□□□□ -0.71
LYSMD3-202ENST00000453259 C10orf55Q5SWW7 151 aa10.62□□□□□ -0.71
LYSMD3-202ENST00000453259 PHLDA1Q8WV24 401 aaPredicted RBP10.62□□□□□ -0.71
LYSMD3-202ENST00000453259 UFD1Q92890 307 aa10.62□□□□□ -0.71
LYSMD3-202ENST00000453259 FANCD2OSQ96PS1 177 aa10.62□□□□□ -0.71
LYSMD3-202ENST00000453259 OR2A7Q96R45 310 aa10.62□□□□□ -0.71
LYSMD3-202ENST00000453259 AIFM2Q9BRQ8 373 aa10.62□□□□□ -0.71
LYSMD3-202ENST00000453259 DCUN1D5Q9BTE7 237 aa10.62□□□□□ -0.71
LYSMD3-202ENST00000453259 KCNK7Q9Y2U2 307 aa10.62□□□□□ -0.71
LYSMD3-202ENST00000453259 PCLOQ9Y6V0 5065 aa10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 MFNGO00587 321 aa10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 TSPAN4O14817 238 aa10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 FCGR3BO75015 233 aa10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 FGF2P09038 288 aa10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 EWSR1Q01844 656 aaKnown RBP eCLIP10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 IRF3Q14653 427 aa10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 C2orf76Q3KRA6 126 aa10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 LAMTOR1Q6IAA8 161 aa10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 LAIR2Q6ISS4 152 aa10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 PUSL1Q8N0Z8 303 aaKnown RBP10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 BPIFB6Q8NFQ5 453 aa10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 GATAD1Q8WUU5 269 aa10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 GFI1Q99684 422 aa10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 HSD17B10Q99714 261 aaKnown RBP10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 SRSF8Q9BRL6 282 aaKnown RBP10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 C6orf62Q9GZU0 229 aaPredicted RBP10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 THYN1Q9P016 225 aa10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 LSM2Q9Y333 95 aaKnown RBP10.61□□□□□ -0.71
LYSMD3-202ENST00000453259 IGLV11-55A0A075B6I3 123 aa10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 CYB5BO43169 146 aa10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 HRASP01112 189 aa10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 IL6RP08887 468 aaPredicted RBP10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 DEFA4P12838 97 aa10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 HIST1H1DP16402 221 aaKnown RBP10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 CTRB1P17538 263 aa10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 DTYMKP23919 212 aa10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 TALDO1P37837 337 aa10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 CTRB2Q6GPI1 263 aa10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 OR10R2Q8NGX6 335 aa10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 OR4A5Q8NH83 315 aa10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 GALNT14Q96FL9 552 aa10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 ATP6V0BQ99437 205 aa10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 DAZ1Q9NQZ3 744 aaKnown RBP10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 AK6Q9Y3D8 172 aaKnown RBP10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 OR2W1Q9Y3N9 320 aa10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 V9GY05 133 aa10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 HECTD4Q9Y4D8 3996 aa10.6□□□□□ -0.71
LYSMD3-202ENST00000453259 METTL21EPA6NDL7 271 aa10.59□□□□□ -0.71
LYSMD3-202ENST00000453259 OR4C46A6NHA9 309 aa10.59□□□□□ -0.71
LYSMD3-202ENST00000453259 HMX3A6NHT5 357 aa10.59□□□□□ -0.71
LYSMD3-202ENST00000453259 HLA-DQB1P01920 261 aa10.59□□□□□ -0.71
LYSMD3-202ENST00000453259 CLEC3BP05452 202 aa10.59□□□□□ -0.71
LYSMD3-202ENST00000453259 RAB6AP20340 208 aa10.59□□□□□ -0.71
LYSMD3-202ENST00000453259 RPL8P62917 257 aaKnown RBP10.59□□□□□ -0.71
LYSMD3-202ENST00000453259 ZNF585BQ52M93 769 aa10.59□□□□□ -0.71
LYSMD3-202ENST00000453259 LIPKQ5VXJ0 399 aa10.59□□□□□ -0.71
LYSMD3-202ENST00000453259 ZNF436Q9C0F3 470 aaPredicted RBP10.59□□□□□ -0.71
LYSMD3-202ENST00000453259 C11orf68Q9H3H3 251 aaKnown RBP10.59□□□□□ -0.71
LYSMD3-202ENST00000453259 RBMX2Q9Y388 322 aaKnown RBP10.59□□□□□ -0.71
LYSMD3-202ENST00000453259 TMEM272A0A1B0GTI8 110 aa10.58□□□□□ -0.72
LYSMD3-202ENST00000453259 DEDDO75618 318 aa10.58□□□□□ -0.72
LYSMD3-202ENST00000453259 GNAO1P09471 354 aa10.58□□□□□ -0.72
LYSMD3-202ENST00000453259 PTBP1P26599 531 aaKnown RBP eCLIP10.58□□□□□ -0.72
LYSMD3-202ENST00000453259 CMC4P56277 68 aaPredicted RBP10.58□□□□□ -0.72
LYSMD3-202ENST00000453259 MSMO1Q15800 293 aa10.58□□□□□ -0.72
LYSMD3-202ENST00000453259 PLET1Q6UQ28 207 aa10.58□□□□□ -0.72
LYSMD3-202ENST00000453259 TMEM91Q6ZNR0 172 aa10.58□□□□□ -0.72
LYSMD3-202ENST00000453259 ZNF502Q8TBZ5 544 aa10.58□□□□□ -0.72
LYSMD3-202ENST00000453259 TMEM190Q8WZ59 177 aa10.58□□□□□ -0.72
LYSMD3-202ENST00000453259 ACOT13Q9NPJ3 140 aa10.58□□□□□ -0.72
LYSMD3-202ENST00000453259 RAB27BO00194 218 aa10.57□□□□□ -0.72
LYSMD3-202ENST00000453259 IFNA4P05014 189 aa10.57□□□□□ -0.72
LYSMD3-202ENST00000453259 AREGP15514 252 aa10.57□□□□□ -0.72
LYSMD3-202ENST00000453259 GNB3P16520 340 aa10.57□□□□□ -0.72
LYSMD3-202ENST00000453259 HLA-GP17693 338 aa10.57□□□□□ -0.72
LYSMD3-202ENST00000453259 CALRP27797 417 aaKnown RBP10.57□□□□□ -0.72
LYSMD3-202ENST00000453259 CLDN12P56749 244 aa10.57□□□□□ -0.72
LYSMD3-202ENST00000453259 ODF3L2Q3SX64 289 aa10.57□□□□□ -0.72
LYSMD3-202ENST00000453259 THOC7Q6I9Y2 204 aaKnown RBP10.57□□□□□ -0.72
LYSMD3-202ENST00000453259 SPSB3Q6PJ21 355 aa10.57□□□□□ -0.72
LYSMD3-202ENST00000453259 UNQ9165/PRO28630Q6UXU0 137 aa10.57□□□□□ -0.72
LYSMD3-202ENST00000453259 ZNF66Q6ZN08 573 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms