RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 ASH1LQ9NR48 2969 aaKnown RBP-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 CDC42SE1Q9NRR8 79 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 OR5AC2Q9NZP5 309 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 EMC3Q9P0I2 261 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 RBMX2Q9Y388 322 aaKnown RBP-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 COQ4Q9Y3A0 265 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 HDGFL3Q9Y3E1 203 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 CITO14578 2027 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 CASP8AP2Q9UKL3 1982 aa-0.3□□□□□ -2.46
SNHG3-203ENST00000447507 LRP2P98164 4655 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 PHRF1Q9P1Y6 1649 aaKnown RBP-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 TENM4Q6N022 2769 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 PCLOQ9Y6V0 5065 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 TRAV1-1A0A0B4J248 108 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 TRBV10-2A0A0K0K1G8 114 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 GOLGA6L7A0A1B0GV03 622 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 OR2T8A6NH00 312 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 H0YC42 278 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 K7EIL1 84 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 K7ERQ8 282 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 M0R2N4 97 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 COX7A2LO14548 114 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 SGCEO43556 437 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 CYTH3O43739 400 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 SNAP29O95721 258 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 DNAL4O96015 105 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 HBZP02008 142 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 HLA-DQB2P05538 268 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 STAG3L2P0CL84 134 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 LIMS3P0CW19 117 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 LIMS4P0CW20 117 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 CRYGAP11844 174 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 SPI1P17947 270 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 EIF2B2P49770 351 aaKnown RBP-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 HIST1H4AP62805 103 aaKnown RBP-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 HPCAP84074 193 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 SMAGPQ0VAQ4 97 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 GNA13Q14344 377 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 C12orf74Q32Q52 190 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 C6orf52Q5T4I8 152 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 LCN15Q6UWW0 184 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 BLIDQ8IZY5 108 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 RIBC1Q8N443 379 aaPredicted RBP-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 LINC00311Q8N616 119 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 NATD1Q8N6N6 113 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 SPERTQ8NA61 448 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 OR1M1Q8NGA1 313 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 C12orf43Q96C57 262 aaKnown RBP-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 CPNE2Q96FN4 548 aaPredicted RBP-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 ERMAPQ96PL5 475 aaPredicted RBP-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 OR7D2Q96RA2 312 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 SLC50A1Q9BRV3 221 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 TMEM109Q9BVC6 243 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 RAB1BQ9H0U4 201 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 TLNRD1Q9H1K6 362 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 ZNHIT6Q9NWK9 470 aaKnown RBP-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 CD300AQ9UGN4 299 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 POFUT2Q9Y2G5 429 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 PCYT1BQ9Y5K3 369 aaPredicted RBP-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 DOPEY1Q5JWR5 2465 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 HSPG2P98160 4391 aa-0.31□□□□□ -2.46
SNHG3-203ENST00000447507 TMEM94Q12767 1356 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 BDP1A6H8Y1 2624 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 ZFYVE26Q68DK2 2539 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 GOLGA8IPA6NC78 632 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 GGT3PA6NGU5 568 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 C21orf140B9A014 251 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 I3L521 148 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 AZIN1O14977 448 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 INE1O15225 51 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 CCL25O15444 150 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 CRXO43186 299 aaPredicted RBP-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 HYPMO75409 117 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 SNAI1O95863 264 aaPredicted RBP-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 MT-CO2P00403 227 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 CTSDP07339 412 aaPredicted RBP-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 GP1BAP07359 652 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 MSMBP08118 114 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 SULT1A3P0DMM9 295 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 SULT1A4P0DMN0 295 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 KDELR1P24390 212 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 AGTR1P30556 359 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 SSR2P43308 183 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 SLCO1A2P46721 670 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 DAD1P61803 113 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 AP1S1P61966 158 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 VSNL1P62760 191 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 AKR1C1Q04828 323 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 STX5Q13190 355 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 PDE6HQ13956 83 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 JOSD1Q15040 202 aaPredicted RBP-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 C4orf26Q17RF5 130 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 DEFB113Q30KQ7 82 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 KRTAP26-1Q6PEX3 210 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 Q6ZQT0 140 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 SSX8Q7RTT4 187 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 SSX6Q7RTT6 188 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 ZNF550Q7Z398 422 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 LRRC6Q86X45 466 aa-0.32□□□□□ -2.46
SNHG3-203ENST00000447507 GKN2Q86XP6 184 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms