RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 THYN1Q9P016 225 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 WNT5AP41221 380 aa14.03□□□□□ -0.16
TCOF1-206ENST00000445265 COL4A3Q01955 1670 aa14.02□□□□□ -0.16
TCOF1-206ENST00000445265 C8orf88P0DMB2 117 aa14.02□□□□□ -0.16
TCOF1-206ENST00000445265 EGR1P18146 543 aa14.02□□□□□ -0.16
TCOF1-206ENST00000445265 IGHV1-2P23083 117 aa14.02□□□□□ -0.16
TCOF1-206ENST00000445265 MC5RP33032 325 aa14.02□□□□□ -0.16
TCOF1-206ENST00000445265 STPG3Q8N7X2 389 aa14.02□□□□□ -0.16
TCOF1-206ENST00000445265 BET1LQ9NYM9 111 aa14.02□□□□□ -0.16
TCOF1-206ENST00000445265 DIRC3C9JPN6 131 aa14.02□□□□□ -0.16
TCOF1-206ENST00000445265 COL8A1P27658 744 aa14.02□□□□□ -0.16
TCOF1-206ENST00000445265 FTH1P19P0C7X4 201 aa14.02□□□□□ -0.17
TCOF1-206ENST00000445265 B3GALT5-AS1P59052 145 aa14.02□□□□□ -0.17
TCOF1-206ENST00000445265 CBY1Q9Y3M2 126 aa14.02□□□□□ -0.17
TCOF1-206ENST00000445265 C9orf172C9J069 976 aa14.02□□□□□ -0.17
TCOF1-206ENST00000445265 RPL23P62829 140 aaKnown RBP14.02□□□□□ -0.17
TCOF1-206ENST00000445265 Q56UQ5 140 aa14.02□□□□□ -0.17
TCOF1-206ENST00000445265 PRSS3P2Q8NHM4 247 aa14.02□□□□□ -0.17
TCOF1-206ENST00000445265 CELA3BP08861 270 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 FOXG1P55316 489 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-206ENST00000445265 REC114Q7Z4M0 266 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 DMRTA2Q96SC8 542 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 ASCL3Q9NQ33 180 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 PRDM6Q9NQX0 595 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 TMEM242Q9NWH2 141 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 HIST1H2BKO60814 126 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 HIST1H2BJP06899 126 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 HIST1H2BOP23527 126 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 HIST1H2BBP33778 126 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 HIST1H2BDP58876 126 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 HIST1H2BCP62807 126 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 HIST2H2BEQ16778 126 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-206ENST00000445265 HIST1H2BHQ93079 126 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 HIST1H2BNQ99877 126 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 HIST1H2BMQ99879 126 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 NABP2Q9BQ15 211 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 TRBV6-6A0A0A6YYG2 114 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 GLRXP35754 106 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 RPL39P5Q59GN2 51 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 ZNRF1Q8ND25 227 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 TMEM191AQ9H0A3 160 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 ZNF430Q9H8G1 570 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-206ENST00000445265 NCBP2LA6PVI3 153 aaKnown RBP14.01□□□□□ -0.17
TCOF1-206ENST00000445265 KRTCAP3Q53RY4 240 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 PCSK4Q6UW60 755 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 BMPERQ8N8U9 685 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 LEAP2Q969E1 77 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 RASL11BQ9BPW5 248 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 ZNF581Q9P0T4 197 aa14.01□□□□□ -0.17
TCOF1-206ENST00000445265 TRBV9A0A0B4J1U6 114 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 HYPMO75409 117 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 TNFSF10P50591 281 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 ARL16Q0P5N6 197 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 ZNF436-AS1Q8NC38 126 aaPredicted RBP14□□□□□ -0.17
TCOF1-206ENST00000445265 DNAJC4Q9NNZ3 241 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 RPLP1P05386 114 aaKnown RBP14□□□□□ -0.17
TCOF1-206ENST00000445265 IL6RP08887 468 aaPredicted RBP14□□□□□ -0.17
TCOF1-206ENST00000445265 TMEM11P17152 192 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 HGFACQ04756 655 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 RTP5Q14D33 572 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 FAM90A1Q86YD7 464 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 MMD2Q8IY49 270 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 RAB1CQ92928 201 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 HSPB7Q9UBY9 170 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 KIAA1671Q9BY89 1806 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 CRYBB3P26998 211 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 SLC35B1P78383 322 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 OR2D3Q8NGH3 330 aa14□□□□□ -0.17
TCOF1-206ENST00000445265 RPL27AP46776 148 aaKnown RBP13.99□□□□□ -0.17
TCOF1-206ENST00000445265 VWA1Q6PCB0 445 aa13.99□□□□□ -0.17
TCOF1-206ENST00000445265 FDCSPQ8NFU4 85 aa13.99□□□□□ -0.17
TCOF1-206ENST00000445265 GATAD1Q8WUU5 269 aa13.99□□□□□ -0.17
TCOF1-206ENST00000445265 TMEM171Q8WVE6 324 aa13.99□□□□□ -0.17
TCOF1-206ENST00000445265 ICE1Q9Y2F5 2266 aa13.99□□□□□ -0.17
TCOF1-206ENST00000445265 WIPF3A6NGB9 483 aa13.99□□□□□ -0.17
TCOF1-206ENST00000445265 A8MWL6 223 aa13.99□□□□□ -0.17
TCOF1-206ENST00000445265 WASHC3Q9Y3C0 194 aa13.99□□□□□ -0.17
TCOF1-206ENST00000445265 PPIHO43447 177 aaKnown RBP13.99□□□□□ -0.17
TCOF1-206ENST00000445265 TIMM23BQ5SRD1 257 aa13.99□□□□□ -0.17
TCOF1-206ENST00000445265 OBSL1O75147 1896 aa13.99□□□□□ -0.17
TCOF1-206ENST00000445265 TRBV24-1A0A075B6N3 115 aa13.98□□□□□ -0.17
TCOF1-206ENST00000445265 CA2P00918 260 aa13.98□□□□□ -0.17
TCOF1-206ENST00000445265 C19orf35Q6ZS72 473 aa13.98□□□□□ -0.17
TCOF1-206ENST00000445265 CORTO00230 105 aa13.98□□□□□ -0.17
TCOF1-206ENST00000445265 SS18L1O75177 396 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-206ENST00000445265 RIGQ13278 110 aa13.98□□□□□ -0.17
TCOF1-206ENST00000445265 OR4B1Q8NGF8 309 aa13.98□□□□□ -0.17
TCOF1-206ENST00000445265 MRPL32Q9BYC8 188 aaKnown RBP13.98□□□□□ -0.17
TCOF1-206ENST00000445265 IGHV2OR16-5A0A0B4J2B6 119 aa13.98□□□□□ -0.17
TCOF1-206ENST00000445265 ZNF785A8K8V0 405 aa13.98□□□□□ -0.17
TCOF1-206ENST00000445265 ZNF25P17030 456 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-206ENST00000445265 CLEC3BP05452 202 aa13.98□□□□□ -0.17
TCOF1-206ENST00000445265 RAB1BQ9H0U4 201 aa13.98□□□□□ -0.17
TCOF1-206ENST00000445265 RAMP3O60896 148 aa13.97□□□□□ -0.17
TCOF1-206ENST00000445265 GNG7O60262 68 aa13.97□□□□□ -0.17
TCOF1-206ENST00000445265 Q0VFX4 171 aa13.97□□□□□ -0.17
TCOF1-206ENST00000445265 DCTN5Q9BTE1 182 aa13.97□□□□□ -0.17
TCOF1-206ENST00000445265 CD55P08174 381 aa13.97□□□□□ -0.17
TCOF1-206ENST00000445265 ATP5G3P48201 142 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms