RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 RELBQ01201 579 aa12.76□□□□□ -0.37
MCF2L-217ENST00000441756 RAB32Q13637 225 aa12.76□□□□□ -0.37
MCF2L-217ENST00000441756 PLGLAQ15195 96 aa12.76□□□□□ -0.37
MCF2L-217ENST00000441756 PSG5Q15238 335 aa12.76□□□□□ -0.37
MCF2L-217ENST00000441756 ZNF429Q86V71 674 aa12.76□□□□□ -0.37
MCF2L-217ENST00000441756 HYLS1Q96M11 299 aa12.76□□□□□ -0.37
MCF2L-217ENST00000441756 YAE1D1Q9NRH1 226 aa12.76□□□□□ -0.37
MCF2L-217ENST00000441756 TMEM160Q9NX00 188 aa12.76□□□□□ -0.37
MCF2L-217ENST00000441756 PITPNC1Q9UKF7 332 aa12.76□□□□□ -0.37
MCF2L-217ENST00000441756 FOXA2Q9Y261 457 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-217ENST00000441756 LSM5Q9Y4Y9 91 aaKnown RBP12.76□□□□□ -0.37
MCF2L-217ENST00000441756 SRRM4A7MD48 611 aaKnown RBP12.75□□□□□ -0.37
MCF2L-217ENST00000441756 RRHO14718 337 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 IGLV2-23P01705 113 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 MBPP02686 304 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-217ENST00000441756 MAS1LP35410 378 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 SRP14P37108 136 aaKnown RBP12.75□□□□□ -0.37
MCF2L-217ENST00000441756 RPL8P62917 257 aaKnown RBP12.75□□□□□ -0.37
MCF2L-217ENST00000441756 ID3Q02535 119 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 KRTAP1-1Q07627 177 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 CD300CQ08708 224 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 ITPR2Q14571 2701 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 IZUMO4Q1ZYL8 232 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 AARDQ4LEZ3 155 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 C11orf87Q6NUJ2 197 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 PRSS54Q6PEW0 395 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 Q6ZRM9 215 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 MMD2Q8IY49 270 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 NPBQ8NG41 125 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 OR52E5Q8NH55 327 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 CLCC1Q96S66 551 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 METTL1Q9UBP6 276 aaKnown RBP12.75□□□□□ -0.37
MCF2L-217ENST00000441756 HSPB7Q9UBY9 170 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 ZNF257Q9Y2Q1 563 aa12.75□□□□□ -0.37
MCF2L-217ENST00000441756 CSMD2Q7Z408 3487 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 FXYD6-FXYD2A0A087WZ82 144 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 BTBD17A6NE02 478 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 K7EPK0 472 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 L7N2F9 121 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 DEDDO75618 318 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 ACTL6BO94805 426 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 NDUFA3O95167 84 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 IFNA17P01571 189 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 IL6RP08887 468 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-217ENST00000441756 SLC25A4P12235 298 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 NUP62P37198 522 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-217ENST00000441756 OR2B8PP59922 312 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 SPCS3P61009 180 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 VAMP2P63027 116 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 TNFRSF9Q07011 255 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 FAM120AOSQ5T036 256 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 NOXA1Q86UR1 476 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 FAM71E2Q8N5Q1 922 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 Q8N6K4 173 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 OR5B3Q8NH48 314 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 WDR89Q96FK6 387 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-217ENST00000441756 CIB3Q96Q77 187 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-217ENST00000441756 RAB40CQ96S21 281 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 SSX3Q99909 188 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 COMMD5Q9GZQ3 224 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 TMEM14BQ9NUH8 114 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 ITPR3Q14573 2671 aa12.74□□□□□ -0.37
MCF2L-217ENST00000441756 E5RGE8 158 aa12.73□□□□□ -0.37
MCF2L-217ENST00000441756 SMLR1H3BR10 107 aa12.73□□□□□ -0.37
MCF2L-217ENST00000441756 SYNGR2O43760 224 aa12.73□□□□□ -0.37
MCF2L-217ENST00000441756 GPR137BO60478 399 aa12.73□□□□□ -0.37
MCF2L-217ENST00000441756 PAX6P26367 422 aa12.73□□□□□ -0.37
MCF2L-217ENST00000441756 HNF4GQ14541 408 aa12.73□□□□□ -0.37
MCF2L-217ENST00000441756 CXorf66Q5JRM2 361 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-217ENST00000441756 PPP1R27Q86WC6 154 aa12.73□□□□□ -0.37
MCF2L-217ENST00000441756 LURAP1LQ8IV03 231 aa12.73□□□□□ -0.37
MCF2L-217ENST00000441756 MRPL41Q8IXM3 137 aaKnown RBP12.73□□□□□ -0.37
MCF2L-217ENST00000441756 OR5R1Q8NH85 324 aa12.73□□□□□ -0.37
MCF2L-217ENST00000441756 MBD2Q9UBB5 411 aa12.73□□□□□ -0.37
MCF2L-217ENST00000441756 NSG2Q9Y328 171 aa12.73□□□□□ -0.37
MCF2L-217ENST00000441756 SIGLEC9Q9Y336 463 aa12.73□□□□□ -0.37
MCF2L-217ENST00000441756 OR51B2Q9Y5P1 312 aa12.73□□□□□ -0.37
MCF2L-217ENST00000441756 TRAV14DV4A0A0A6YYC5 116 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 NCBP2LA6PVI3 153 aaKnown RBP12.72□□□□□ -0.37
MCF2L-217ENST00000441756 HMSDA8MTL9 139 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 CEBPZOSA8MTT3 80 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 BOLA2-SMG1P6H3BVE0 249 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 SSSCA1O60232 199 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 LYL1P12980 280 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 CD99P14209 185 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 CD24P25063 80 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 HSPE1P61604 102 aaKnown RBP12.72□□□□□ -0.37
MCF2L-217ENST00000441756 POLR2GP62487 172 aaKnown RBP eCLIP12.72□□□□□ -0.37
MCF2L-217ENST00000441756 RPL23AP62750 156 aaKnown RBP12.72□□□□□ -0.37
MCF2L-217ENST00000441756 PRSS8Q16651 343 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 DEFB112Q30KQ8 113 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 PDLIM3Q53GG5 364 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-217ENST00000441756 C16orf82Q7Z2V1 217 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 OR1L8Q8NGR8 309 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 DCUN1D4Q92564 292 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 ZDHHC16Q969W1 377 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 RITA1Q96K30 269 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 QTRT1Q9BXR0 403 aaKnown RBP12.72□□□□□ -0.37
MCF2L-217ENST00000441756 FBXL15Q9H469 300 aa12.72□□□□□ -0.37
MCF2L-217ENST00000441756 ZNF430Q9H8G1 570 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms