RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 CEACAM1P13688 526 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 F2RP25116 425 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 CHRNA7P36544 502 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 CEACAM6P40199 344 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 CD200P41217 278 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 LPAR6P43657 344 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 FABP6P51161 128 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 CAV2P51636 162 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 ARHGDIBP52566 201 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 AKR1C2P52895 323 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 POLR2GP62487 172 aaKnown RBP eCLIP2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 RPL23AP62750 156 aaKnown RBP2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 EWSR1Q01844 656 aaKnown RBP eCLIP2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 AKR1C1Q04828 323 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF154Q13106 437 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 SCGB2A2Q13296 93 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 HMGN3Q15651 99 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 NMSQ5H8A3 153 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 C10orf91Q5T1B1 145 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 ATRAIDQ6UW56 229 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF497Q6ZNH5 498 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 COMMD1Q8N668 190 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 TMEM252Q8N6L7 170 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 STPG4Q8N801 248 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 MAPKAPK5-AS1Q8N8E1 139 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 LYPD6BQ8NI32 183 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 RNASE11Q8TAA1 199 aaKnown RBP2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 PHLDA1Q8WV24 401 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 IL1F10Q8WWZ1 152 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 LSM10Q969L4 123 aaKnown RBP2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 GPR146Q96CH1 333 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 STARD4Q96DR4 205 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 SEC11CQ9BY50 192 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 NKX6-2Q9C056 277 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 MAGT1Q9H0U3 335 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 TLNRD1Q9H1K6 362 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 OPN3Q9H1Y3 402 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 TMEM231Q9H6L2 316 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 HES4Q9HCC6 221 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF71Q9NQZ8 489 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 C19orf12Q9NSK7 152 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 LYRM2Q9NU23 88 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 UQCC1Q9NVA1 299 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 DCAF16Q9NXF7 216 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 TAAR3PQ9P1P4 343 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR1A1Q9P1Q5 309 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 CACFD1Q9UGQ2 172 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 CARHSP1Q9Y2V2 147 aaKnown RBP2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 RBM7Q9Y580 266 aaKnown RBP2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 EML6Q6ZMW3 1958 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 NCKAP5O14513 1909 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 TRIOBPQ9H2D6 2365 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGHV2OR16-5A0A0B4J2B6 119 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGKV3D-20A0A0C4DH25 116 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGHV1-18A0A0C4DH31 117 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGHV3-64DA0A0J9YX35 117 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGSF23A1L1A6 192 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 TMEM89A2RUT3 159 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR5H1A6NKK0 313 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 SMIM1B2RUZ4 78 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 UMAD1C9J7I0 102 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 AGPAT2O15120 278 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 SIGLEC5O15389 551 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 NUPL2O15504 423 aaKnown RBP2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 MLNRO43193 412 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 SSSCA1O60232 199 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 PITX3O75364 302 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 TNFSF13O75888 250 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 DFFBO76075 338 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 IFNA5P01569 189 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGLV1-44P01699 117 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 PRH1P02810 166 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 CD5P06127 495 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 SFTA3P0C7M3 94 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR8U9P0C7N5 309 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 CECR9P0C854 216 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGHV4-31P0DP07 118 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 PSG2P11465 335 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 MUC1P15941 1255 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 ADCYAP1P18509 176 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 IL2RGP31785 369 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 CD80P33681 288 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 SNCAP37840 140 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 CEBPDP49716 269 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 SULT1A1P50225 295 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 DYNLT3P51808 116 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 PAX9P55771 341 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 BAXQ07812 192 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 AESQ08117 197 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF266Q14584 549 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 CLINT1Q14677 625 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 PEA15Q15121 130 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 MSMO1Q15800 293 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 GUCA2BQ16661 112 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 GUK1Q16774 197 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 SMIM21Q3B7S5 101 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 TIMM23BQ5SRD1 257 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 C1orf185Q5T7R7 199 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 PRAMEF6Q5VXH4 476 aa2.78□□□□□ -1.96
HMGB3P11-201ENST00000440127 WDR82Q6UXN9 313 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms