RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 OVOL3O00110 214 aa17.18■□□□□ 0.34
PTPRF-207ENST00000436724 METTL15P1P0C7V9 234 aa17.18■□□□□ 0.34
PTPRF-207ENST00000436724 GUK1Q16774 197 aa17.18■□□□□ 0.34
PTPRF-207ENST00000436724 LINC00311Q8N616 119 aa17.18■□□□□ 0.34
PTPRF-207ENST00000436724 C8orf46Q8TAG6 207 aa17.18■□□□□ 0.34
PTPRF-207ENST00000436724 RFNGQ9Y644 331 aa17.18■□□□□ 0.34
PTPRF-207ENST00000436724 SPG11Q96JI7 2443 aa17.18■□□□□ 0.34
PTPRF-207ENST00000436724 RAB5CP51148 216 aa17.18■□□□□ 0.34
PTPRF-207ENST00000436724 ST6GALNAC6Q969X2 333 aa17.18■□□□□ 0.34
PTPRF-207ENST00000436724 SSBP3Q9BWW4 388 aaPredicted RBP17.18■□□□□ 0.34
PTPRF-207ENST00000436724 MLXQ9UH92 298 aa17.18■□□□□ 0.34
PTPRF-207ENST00000436724 STRAPQ9Y3F4 350 aaKnown RBP17.18■□□□□ 0.34
PTPRF-207ENST00000436724 CSMD2Q7Z408 3487 aa17.17■□□□□ 0.34
PTPRF-207ENST00000436724 IGHV2-26A0A0B4J1V2 119 aa17.17■□□□□ 0.34
PTPRF-207ENST00000436724 PPT1P50897 306 aa17.17■□□□□ 0.34
PTPRF-207ENST00000436724 ETV3LQ6ZN32 361 aa17.17■□□□□ 0.34
PTPRF-207ENST00000436724 C8orf31Q8N9H6 132 aa17.17■□□□□ 0.34
PTPRF-207ENST00000436724 LY6G5BQ8NDX9 201 aa17.17■□□□□ 0.34
PTPRF-207ENST00000436724 SAV1Q9H4B6 383 aaPredicted RBP17.17■□□□□ 0.34
PTPRF-207ENST00000436724 TET2Q6N021 2002 aaPredicted RBP17.17■□□□□ 0.34
PTPRF-207ENST00000436724 SRRM4A7MD48 611 aaKnown RBP17.16■□□□□ 0.34
PTPRF-207ENST00000436724 SULT1A1P50225 295 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 RELBQ01201 579 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 BAXQ07812 192 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 ARL16Q0P5N6 197 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 PEA15Q15121 130 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 OR4A47Q6IF82 309 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 STX12Q86Y82 276 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 OR13D1Q8NGV5 346 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 RXFP4Q8TDU9 374 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 KPTNQ9Y664 436 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 COLCA2A8K830 154 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 PRH1P02810 166 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 LIPFP07098 398 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 COX7A1P24310 79 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 ARF6P62330 175 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 TMEM182Q6ZP80 229 aaPredicted RBP17.16■□□□□ 0.34
PTPRF-207ENST00000436724 HAPLN4Q86UW8 402 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 OR4A16Q8NH70 328 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 DTD1Q8TEA8 209 aa17.16■□□□□ 0.34
PTPRF-207ENST00000436724 KLF2Q9Y5W3 355 aaPredicted RBP17.16■□□□□ 0.34
PTPRF-207ENST00000436724 A0A1W2PPH5 198 aa17.15■□□□□ 0.34
PTPRF-207ENST00000436724 H0YJW9 148 aa17.15■□□□□ 0.34
PTPRF-207ENST00000436724 IFNA17P01571 189 aa17.15■□□□□ 0.34
PTPRF-207ENST00000436724 CRYBA1P05813 215 aa17.15■□□□□ 0.34
PTPRF-207ENST00000436724 RTL8BQ17RB0 113 aa17.15■□□□□ 0.34
PTPRF-207ENST00000436724 TMEM186Q96B77 213 aa17.15■□□□□ 0.34
PTPRF-207ENST00000436724 CHD6Q8TD26 2715 aa17.15■□□□□ 0.34
PTPRF-207ENST00000436724 CEBPZOSA8MTT3 80 aa17.15■□□□□ 0.34
PTPRF-207ENST00000436724 TLE4Q04727 773 aa17.15■□□□□ 0.34
PTPRF-207ENST00000436724 Q8N7P7 452 aa17.15■□□□□ 0.34
PTPRF-207ENST00000436724 LOC105371242A0A075B767 164 aa17.14■□□□□ 0.33
PTPRF-207ENST00000436724 IGLV1-47P01700 117 aa17.14■□□□□ 0.33
PTPRF-207ENST00000436724 IGHV4-39P01824 125 aa17.14■□□□□ 0.33
PTPRF-207ENST00000436724 ATP6V0CP27449 155 aa17.14■□□□□ 0.33
PTPRF-207ENST00000436724 TAS2R30P59541 319 aa17.14■□□□□ 0.33
PTPRF-207ENST00000436724 RPS16P62249 146 aaKnown RBP17.14■□□□□ 0.33
PTPRF-207ENST00000436724 OR5AN1Q8NGI8 311 aa17.14■□□□□ 0.33
PTPRF-207ENST00000436724 IGFBPL1Q8WX77 278 aa17.14■□□□□ 0.33
PTPRF-207ENST00000436724 NABP2Q9BQ15 211 aa17.14■□□□□ 0.33
PTPRF-207ENST00000436724 BPESC1Q9GZL8 116 aa17.14■□□□□ 0.33
PTPRF-207ENST00000436724 EIF5A2Q9GZV4 153 aaKnown RBP17.14■□□□□ 0.33
PTPRF-207ENST00000436724 SIRT7Q9NRC8 400 aa17.14■□□□□ 0.33
PTPRF-207ENST00000436724 MAP1AP78559 2803 aaPredicted RBP17.14■□□□□ 0.33
PTPRF-207ENST00000436724 TNCP24821 2201 aa17.14■□□□□ 0.33
PTPRF-207ENST00000436724 ZFP36P26651 326 aaKnown RBP17.13■□□□□ 0.33
PTPRF-207ENST00000436724 ZNF137PP52743 207 aa17.13■□□□□ 0.33
PTPRF-207ENST00000436724 OR4C12Q96R67 309 aa17.13■□□□□ 0.33
PTPRF-207ENST00000436724 SPOCK3Q9BQ16 436 aa17.13■□□□□ 0.33
PTPRF-207ENST00000436724 A1L4Q6 167 aa17.13■□□□□ 0.33
PTPRF-207ENST00000436724 FAM90A9PA6NNJ1 464 aa17.13■□□□□ 0.33
PTPRF-207ENST00000436724 MYOD1P15172 320 aa17.13■□□□□ 0.33
PTPRF-207ENST00000436724 ZNF266Q14584 549 aa17.13■□□□□ 0.33
PTPRF-207ENST00000436724 AARDQ4LEZ3 155 aa17.13■□□□□ 0.33
PTPRF-207ENST00000436724 TGIF2LXQ8IUE1 241 aa17.13■□□□□ 0.33
PTPRF-207ENST00000436724 FAM213BQ8TBF2 198 aa17.13■□□□□ 0.33
PTPRF-207ENST00000436724 CLEC7AQ9BXN2 247 aa17.13■□□□□ 0.33
PTPRF-207ENST00000436724 SMCO4Q9NRQ5 59 aa17.13■□□□□ 0.33
PTPRF-207ENST00000436724 HRASP01112 189 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 APOA2P02652 100 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 AKR1C3P42330 323 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 HLA-DRB5Q30154 266 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 AKIRIN2Q53H80 203 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 OR8G2PQ6IF36 304 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 OR2G3Q8NGZ4 309 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 CCL19Q99731 98 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 CELSR2Q9HCU4 2923 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 WNK2Q9Y3S1 2297 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 CENPEQ02224 2701 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 RBP4P02753 201 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 RAB13P51153 203 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 LINC00518Q8N0U6 118 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 PNKDQ8N490 385 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 ATP5SQ99766 215 aa17.12■□□□□ 0.33
PTPRF-207ENST00000436724 IGHV3-72A0A0B4J1Y9 119 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 RUNX1Q01196 453 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 TMEM14EPQ6UXP3 125 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 HARBI1Q96MB7 349 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 CLCC1Q96S66 551 aa17.11■□□□□ 0.33
PTPRF-207ENST00000436724 A0A1B0GV50 99 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms