RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 FOXH1O75593 365 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 RAB36O95755 333 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 MT-ND4P03905 459 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 IL3P08700 152 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 LYNX1P0DP58 116 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 RCC1P18754 421 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 CRHBPP24387 322 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 HTR2AP28223 471 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 HTR2CP28335 458 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 INPP1P49441 399 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 BIDP55957 195 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 RANP62826 216 aaKnown RBP3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 HBA1P69905 142 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 CAV1Q03135 178 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 CD47Q08722 323 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF763Q0D2J5 394 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 C2orf80Q0P641 193 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 PDE7AQ13946 482 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 RHEBQ15382 184 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 TMEM236Q5W0B7 351 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 FAM71E1Q6IPT2 247 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 CASP12Q6UXS9 341 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 AHSA2Q719I0 299 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 CBLN2Q8IUK8 224 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 KIR3DL3Q8N743 410 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 RNF148Q8N7C7 305 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNRF1Q8ND25 227 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF738Q8NE65 137 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 BEST4Q8NFU0 473 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR52E4Q8NGH9 312 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR10D4PQ8NGN7 298 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR5W2Q8NH69 310 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 OCC1Q8TAD7 63 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 MARCH1Q8TCQ1 289 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 ASB13Q8WXK3 278 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 ST8SIA1Q92185 356 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 PINX1Q96BK5 328 aaKnown RBP3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 MRAP2Q96G30 205 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 TIMD4Q96H15 378 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 RBP7Q96R05 134 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR5B12Q96R08 314 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 TP53RKQ96S44 253 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 TBX5Q99593 518 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 GLIPR2Q9H4G4 154 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 PLEKHA1Q9HB21 404 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 ADGRL4Q9HBW9 690 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 RAB18Q9NP72 206 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 SPANXA1Q9NS26 97 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 CNOT2Q9NZN8 540 aaKnown RBP3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF222Q9UK12 451 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 EXOSC1Q9Y3B2 195 aaKnown RBP3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 HDGFL3Q9Y3E1 203 aa3.38□□□□□ -1.87
HMGB3P5-201ENST00000428894 NUP214P35658 2090 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 TRAV30A0A087WSZ9 112 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 C5orf63A6NC05 138 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF726A6NNF4 738 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 FOXI3A8MTJ6 420 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 ARPC1BO15143 372 aaKnown RBP3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 AIREO43918 545 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 GNG7O60262 68 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR7C2O60412 319 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 CDS2O95674 445 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 IGKV1D-16P01601 117 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 PMP2P02689 132 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 FABP3P05413 133 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 CST2P09228 141 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 CECR9P0C854 216 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 NCK1P16333 377 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 GLRXP35754 106 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 GLP1RP43220 463 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 RAG2P55895 527 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 PIGPP57054 158 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 SEC61GP60059 68 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 RPS23P62266 143 aaKnown RBP3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 SLC35A1P78382 337 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 H3F3AP84243 136 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 ZNF117Q03924 483 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 MXD1Q05195 221 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 CRMP1Q14194 572 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 CD226Q15762 336 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 LDLRAD2Q5SZI1 272 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 TSPO2Q5TGU0 170 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 ASPHD2Q6ICH7 369 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR52W1Q6IF63 320 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 CBLN3Q6UW01 205 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 OLIG3Q7RTU3 272 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 SLC30A8Q8IWU4 369 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 JAGN1Q8N5M9 183 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 SAMD12Q8N8I0 201 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 COX18Q8N8Q8 333 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR4F6Q8NGB9 312 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR5D13Q8NGL4 314 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR1L6Q8NGR2 347 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR6N1Q8NGY5 312 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 OR52E5Q8NH55 327 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 RAB8BQ92930 207 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 ST6GALNAC6Q969X2 333 aa3.37□□□□□ -1.87
HMGB3P5-201ENST00000428894 CXorf58Q96LI9 332 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms