RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 OR2W1Q9Y3N9 320 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 TSSC4Q9Y5U2 329 aaPredicted RBP4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 ATP23Q9Y6H3 246 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 HEATR5AQ86XA9 2040 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 TRBV6-6A0A0A6YYG2 114 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 TRBV7-9A0A0J9YWB2 115 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 A0A1B0GUS0 222 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 HELTA6NFD8 242 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 SHISA9B4DS77 424 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 H3BP45 60 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 TNFSF11O14788 317 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 SYNGR1O43759 233 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 PGLYRP1O75594 196 aaPredicted RBP4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 OR7C1O76099 320 aaPredicted RBP4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 HNRNPA1P09651 372 aaKnown RBP eCLIP4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 CT62P0C5K7 136 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 FAM87AP0C7U9 286 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 IL11P20809 199 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 CLDN17P56750 224 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 POU3F1Q03052 451 aaPredicted RBP4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 MFAP5Q13361 173 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 KIR3DS1Q14943 382 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 IGFBP7Q16270 282 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 TAL2Q16559 108 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 PEAR1Q5VY43 1037 aaPredicted RBP4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 OTPQ5XKR4 325 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 TXNDC8Q6A555 127 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 PQLC2Q6ZP29 291 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 ZNF818PQ6ZRF7 136 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 SHISA6Q6ZSJ9 500 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 ANKRD37Q7Z713 158 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 HAPLN4Q86UW8 402 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 PRR22Q8IZ63 422 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 GCSAMQ8N6F7 178 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 TPRX1Q8N7U7 411 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 OR51H1Q8NH63 302 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 OR1L3Q8NH93 324 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 OR1F12Q8NHA8 337 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 OR2T6Q8NHC8 308 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 C16orf52Q8NHV5 167 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 OCC1Q8TAD7 63 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 RDH5Q92781 318 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 DNAJA3Q96EY1 480 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 SPACA5Q96QH8 159 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 TMEM126AQ9H061 195 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 RNF181Q9P0P0 153 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 HIGD1BQ9P298 99 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 WDR83OSQ9Y284 106 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 LHFPL6Q9Y693 200 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 V9GYV3 84 aa4.72□□□□□ -1.65
VTI1BP4-201ENST00000427516 COL4A5P29400 1685 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 IGKV1D-8A0A087WSZ0 117 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 IGKV1-9A0A0C4DH69 117 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 KBTBD11-OT1A0A1B0GTJ5 212 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 TEX48A0A1B0GUV7 120 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 A0A1W2PP11 408 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 PGPEP1LA6NFU8 196 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 TMEM150CB9EJG8 249 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 FNDC10F2Z333 226 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 SMAD7O15105 426 aaKnown RBP4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 NAPSAO96009 420 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 CA1P00915 261 aaPredicted RBP4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 IGHG4P01861 327 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 IAPPP10997 89 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 HLA-DRB4P13762 266 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 RPL31P62899 125 aaKnown RBP4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 HBBP68871 147 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 PSG4Q00888 419 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 PMP22Q01453 160 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 SRSF1Q07955 248 aaKnown RBP eCLIP4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 MLF2Q15773 248 aaPredicted RBP4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 CEACAM16Q2WEN9 425 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 ZNF585BQ52M93 769 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 CT83Q5H943 113 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 LINC01545Q5VT33 79 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 ZFAND6Q6FIF0 208 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 RHBDD2Q6NTF9 364 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 ODF3L1Q8IXM7 274 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 MKXQ8IYA7 352 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 ATOH7Q8N100 152 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 TEX29Q8N6K0 151 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 OR2M3Q8NG83 312 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 BAHD1Q8TBE0 780 aaPredicted RBP4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 FAM131CQ96AQ9 280 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 CLDN23Q96B33 292 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 C1QTNF4Q9BXJ3 329 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 PLEKHA3Q9HB20 300 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 SH2D2AQ9NP31 389 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 PNRC2Q9NPJ4 139 aaKnown RBP4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 YAE1D1Q9NRH1 226 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 THYN1Q9P016 225 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 CLCF1Q9UBD9 225 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 WNT16Q9UBV4 365 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 C19orf25Q9UFG5 118 aaPredicted RBP4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 PILRAQ9UKJ1 303 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 SLC17A4Q9Y2C5 497 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 LOXL2Q9Y4K0 774 aa4.71□□□□□ -1.66
VTI1BP4-201ENST00000427516 TNFRSF18Q9Y5U5 241 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms