RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 OOEPA6NGQ2 149 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 B4DEV8 164 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 E9PLD3 99 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 H0YL77 283 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 PIRO00625 290 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 FFAR1O14842 300 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 NUPR1O60356 82 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 HYPMO75409 117 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 NME6O75414 186 aaPredicted RBP2.18□□□□□ -2.06
LINC01040-201ENST00000425048 TRAPPC6AO75865 159 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 MPZL1O95297 269 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 SOX14O95416 240 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 IFNA5P01569 189 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 IGHG4P01861 327 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 MAS1P04201 325 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 GAPDHP04406 335 aaKnown RBP2.18□□□□□ -2.06
LINC01040-201ENST00000425048 IL3P08700 152 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 OR4Q2P0C623 313 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF286BP0CG31 522 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 SMIM10L1P0DMW3 83 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 CALCBP10092 127 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 PTHLHP12272 177 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 CSRP1P21291 193 aaKnown RBP2.18□□□□□ -2.06
LINC01040-201ENST00000425048 MSR1P21757 451 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 ADORA2BP29275 332 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 TSPOP30536 169 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 GABRA3P34903 492 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 ARL2P36404 184 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 TNFSF9P41273 254 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 GABRA2P47869 451 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 HINT1P49773 126 aaPredicted RBP2.18□□□□□ -2.06
LINC01040-201ENST00000425048 TAS2R41P59536 307 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 RPS15P62841 145 aaKnown RBP2.18□□□□□ -2.06
LINC01040-201ENST00000425048 SELENOWP63302 87 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 HIST1H3AP68431 136 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 PLCXD2Q0VAA5 305 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 SMAGPQ0VAQ4 97 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 TMEM267Q0VDI3 215 aaPredicted RBP2.18□□□□□ -2.06
LINC01040-201ENST00000425048 PAFAH1B3Q15102 231 aaKnown RBP2.18□□□□□ -2.06
LINC01040-201ENST00000425048 VAMP3Q15836 100 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF699Q32M78 642 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 PGGHGQ32M88 737 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF791Q3KP31 576 aaPredicted RBP2.18□□□□□ -2.06
LINC01040-201ENST00000425048 CEACAM21Q3KPI0 293 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 TP53I3Q53FA7 332 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 IFI44LQ53G44 452 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 TRMT12Q53H54 448 aaKnown RBP2.18□□□□□ -2.06
LINC01040-201ENST00000425048 C5orf47Q569G3 176 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 SOHLH1Q5JUK2 328 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 ACTL10Q5JWF8 245 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 AMMECR1LQ6DCA0 310 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 RPL7L1Q6DKI1 246 aaKnown RBP2.18□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF322Q6U7Q0 402 aaPredicted RBP2.18□□□□□ -2.06
LINC01040-201ENST00000425048 TOMM20LQ6UXN7 152 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 SERPINA9Q86WD7 417 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 C1orf174Q8IYL3 243 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 MUC15Q8N387 334 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 MTURNQ8N3F0 131 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 KRTCAP2Q8N6L1 136 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 INO80EQ8NBZ0 244 aaPredicted RBP2.18□□□□□ -2.06
LINC01040-201ENST00000425048 APCDD1LQ8NCL9 501 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 OR4F17Q8NGA8 305 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 OR4B1Q8NGF8 309 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 OR52E1Q8NGJ3 308 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 OR5AR1Q8NGP9 310 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 OR10X1Q8NGY0 326 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 OR5B3Q8NH48 314 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 OR5K2Q8NHB8 316 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 RNF133Q8WVZ7 376 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 FAM3CQ92520 227 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 DLX4Q92988 240 aaPredicted RBP2.18□□□□□ -2.06
LINC01040-201ENST00000425048 PTX4Q96A99 478 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 SEH1LQ96EE3 360 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 DYNLL2Q96FJ2 89 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 SMIM10Q96HG1 83 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 SEC22AQ96IW7 307 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 SLC35G5Q96KT7 338 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 ZNF681Q96N22 645 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 TSSK3Q96PN8 268 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 OR4F4Q96R69 305 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 SIGMAR1Q99720 223 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 VAMP8Q9BV40 100 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 LINC00470Q9BZP3 86 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 NMES1Q9C002 83 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 DPY30Q9C005 99 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 OR11A1Q9GZK7 315 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 CXCL16Q9H2A7 254 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 LINC00597Q9H2U6 94 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 VCX2Q9H322 139 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 UBE2ZQ9H832 354 aaPredicted RBP2.18□□□□□ -2.06
LINC01040-201ENST00000425048 RDH14Q9HBH5 336 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 LRTM1Q9HBL6 345 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 SGK2Q9HBY8 427 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 NGBQ9NPG2 151 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 KCNJ16Q9NPI9 418 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 TMEM106BQ9NUM4 274 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 BET1LQ9NYM9 111 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 COPS7AQ9UBW8 275 aa2.18□□□□□ -2.06
LINC01040-201ENST00000425048 MRM2Q9UI43 246 aaKnown RBP2.18□□□□□ -2.06
LINC01040-201ENST00000425048 MEMO1Q9Y316 297 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms