RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 IGHV3-43A0A0B4J1X8 118 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 ATXN7O15265 892 aaPredicted RBP13.7□□□□□ -0.22
CMTM3-202ENST00000424011 IGHV3-43DP0DP04 118 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 ATP6V0CP27449 155 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 BAXQ07812 192 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 C4orf17Q53FE4 359 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 GAFA1Q96PS6 74 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 RAB40CQ96S21 281 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 AGMATQ9BSE5 352 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 PSG11Q9UQ72 335 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 PCNX1Q96RV3 2341 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 CHD3Q12873 2000 aaKnown RBP13.7□□□□□ -0.22
CMTM3-202ENST00000424011 FAM90A27PA6NNH2 459 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 H3BP45 60 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 CLDN1O95832 211 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 APOBEC3AP31941 199 aaPredicted RBP13.7□□□□□ -0.22
CMTM3-202ENST00000424011 TMEM30BQ3MIR4 351 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 FGFRL1Q8N441 504 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 DEFB108BQ8NET1 73 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 TVP23CQ96ET8 276 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 DYNLRB1Q9NP97 96 aa13.7□□□□□ -0.22
CMTM3-202ENST00000424011 E7EQL1 145 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 ITGB1BP1O14713 200 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 GYPAP02724 150 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 GPR12P47775 334 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 ERVFC1-1P60608 527 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 RPL23AP62750 156 aaKnown RBP13.69□□□□□ -0.22
CMTM3-202ENST00000424011 EFNB3Q15768 340 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 RELNP78509 3460 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 KBTBD11-OT1A0A1B0GTJ5 212 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 RBFOX3A6NFN3 312 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 DEFB108AA8MXU0 73 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 M0QZK8 103 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 GGCTO75223 188 aaKnown RBP13.69□□□□□ -0.22
CMTM3-202ENST00000424011 RPLP1P05386 114 aaKnown RBP13.69□□□□□ -0.22
CMTM3-202ENST00000424011 CGB3P0DN86 165 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 CGB7P0DN87 165 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 RAB7AP51149 207 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 RPL30P62888 115 aaKnown RBP13.69□□□□□ -0.22
CMTM3-202ENST00000424011 RPP30P78346 268 aaKnown RBP13.69□□□□□ -0.22
CMTM3-202ENST00000424011 LTC4SQ16873 150 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 SAPCD1Q5SSQ6 148 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 ZNF429Q86V71 674 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 OR2G3Q8NGZ4 309 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 CCL13Q99616 98 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 CBLN4Q9NTU7 201 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 CLN8Q9UBY8 286 aa13.69□□□□□ -0.22
CMTM3-202ENST00000424011 A0A1B0GV50 99 aa13.68□□□□□ -0.22
CMTM3-202ENST00000424011 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.68□□□□□ -0.22
CMTM3-202ENST00000424011 B9A039 149 aa13.68□□□□□ -0.22
CMTM3-202ENST00000424011 FAM90A26D6RGX4 464 aa13.68□□□□□ -0.22
CMTM3-202ENST00000424011 LOXL3P58215 753 aa13.68□□□□□ -0.22
CMTM3-202ENST00000424011 HAGHQ16775 308 aa13.68□□□□□ -0.22
CMTM3-202ENST00000424011 WSB1Q9Y6I7 421 aa13.68□□□□□ -0.22
CMTM3-202ENST00000424011 CADP27708 2225 aa13.68□□□□□ -0.22
CMTM3-202ENST00000424011 RAMP3O60896 148 aa13.68□□□□□ -0.22
CMTM3-202ENST00000424011 SRP19P09132 144 aaKnown RBP13.68□□□□□ -0.22
CMTM3-202ENST00000424011 TMEM267Q0VDI3 215 aaPredicted RBP13.68□□□□□ -0.22
CMTM3-202ENST00000424011 FAM213BQ8TBF2 198 aa13.68□□□□□ -0.22
CMTM3-202ENST00000424011 ABHD14AQ9BUJ0 271 aa13.68□□□□□ -0.22
CMTM3-202ENST00000424011 PPIAL4EA0A075B759 164 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 PPIAL4DF5H284 164 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 TMEM178BH3BS89 294 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 SYNGR2O43760 224 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 PPIAL4FP0DN26 164 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 IAPPP10997 89 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 CORO2AQ92828 525 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 PPIAL4AQ9Y536 164 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 TMPRSS2O15393 492 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 RUNX1Q01196 453 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 C17orf58Q2M2W7 97 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 BTNL3Q6UXE8 466 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 SLC35E3Q7Z769 313 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 ZCCHC24Q8N2G6 241 aaKnown RBP13.67□□□□□ -0.22
CMTM3-202ENST00000424011 LINC01560Q8TB33 94 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 NIPSNAP3BQ9BS92 247 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 TMEM106BQ9NUM4 274 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 GAB2Q9UQC2 676 aa13.67□□□□□ -0.22
CMTM3-202ENST00000424011 hADV38S2A0JD32 116 aa13.66□□□□□ -0.22
CMTM3-202ENST00000424011 CLDN14O95500 239 aa13.66□□□□□ -0.22
CMTM3-202ENST00000424011 RND2P52198 227 aa13.66□□□□□ -0.22
CMTM3-202ENST00000424011 TAS2R30P59541 319 aa13.66□□□□□ -0.22
CMTM3-202ENST00000424011 MRPL52Q86TS9 123 aaKnown RBP13.66□□□□□ -0.22
CMTM3-202ENST00000424011 FAM216BQ8N7L0 139 aa13.66□□□□□ -0.22
CMTM3-202ENST00000424011 OR1P1Q8NH06 330 aa13.66□□□□□ -0.22
CMTM3-202ENST00000424011 ATP5SQ99766 215 aa13.66□□□□□ -0.22
CMTM3-202ENST00000424011 LINC00574Q9H8X3 128 aa13.66□□□□□ -0.22
CMTM3-202ENST00000424011 SMG1Q96Q15 3661 aaKnown RBP13.66□□□□□ -0.22
CMTM3-202ENST00000424011 COL6A6A6NMZ7 2263 aa13.66□□□□□ -0.22
CMTM3-202ENST00000424011 B4DEV8 164 aa13.65□□□□□ -0.22
CMTM3-202ENST00000424011 CEBPGP53567 150 aa13.65□□□□□ -0.22
CMTM3-202ENST00000424011 BRWD1-AS2P59051 145 aa13.65□□□□□ -0.22
CMTM3-202ENST00000424011 ADORA2A-AS1P86434 159 aa13.65□□□□□ -0.22
CMTM3-202ENST00000424011 ZNF816Q0VGE8 651 aaPredicted RBP13.65□□□□□ -0.22
CMTM3-202ENST00000424011 TGIF2LYQ8IUE0 185 aa13.65□□□□□ -0.22
CMTM3-202ENST00000424011 CCL17Q92583 94 aa13.65□□□□□ -0.22
CMTM3-202ENST00000424011 KALRNO60229 2985 aa13.65□□□□□ -0.22
CMTM3-202ENST00000424011 A6NNC1 897 aa13.65□□□□□ -0.22
CMTM3-202ENST00000424011 C17orf98A8MV24 154 aa13.65□□□□□ -0.22
CMTM3-202ENST00000424011 KRASP01116 189 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms