RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 RGPD3A6NKT7 1758 aaPredicted RBP10.25□□□□□ -0.77
UBR4-205ENST00000417040 RGPD4Q7Z3J3 1758 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 QSER1Q2KHR3 1735 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 C1QTNF9BB2RNN3 333 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 H3BUT2 72 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 ARID1AO14497 2285 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 IGHV3OR16-10A0A075B7F0 116 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 ICAM4Q14773 271 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 LHFPL4Q7Z7J7 247 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 ODAMA1E959 279 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 ACSF3Q4G176 576 aaPredicted RBP10.25□□□□□ -0.77
UBR4-205ENST00000417040 PRDM14Q9GZV8 571 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 SDF2L1Q9HCN8 221 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 TDRD15B5MCY1 1934 aaKnown RBP10.24□□□□□ -0.77
UBR4-205ENST00000417040 MIR17HGQ75NE6 70 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 OR51G1Q8NGK1 321 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 SPCS1Q9Y6A9 102 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 SS18L1O75177 396 aaPredicted RBP10.24□□□□□ -0.77
UBR4-205ENST00000417040 ZNF56Q15929 161 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 UNQ5815/PRO19632Q6UWF5 114 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 C1QL4Q86Z23 238 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 GCSAMQ8N6F7 178 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 PLSCR2Q9NRY7 297 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 PGPEP1LA6NFU8 196 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 C16orf97H3BN30 126 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 PRB3Q04118 309 aaPredicted RBP10.24□□□□□ -0.77
UBR4-205ENST00000417040 MEIG1Q5JSS6 88 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 IGHV3OR16-8A0A075B7F1 116 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 PPP1R17O96001 155 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 C1QTNF9P0C862 333 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 PF4V1P10720 104 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 ZNRF1Q8ND25 227 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 KLF14Q8TD94 323 aaPredicted RBP10.24□□□□□ -0.77
UBR4-205ENST00000417040 MARS2Q96GW9 593 aaKnown RBP10.24□□□□□ -0.77
UBR4-205ENST00000417040 MEGF9Q9H1U4 602 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 PLXNB2O15031 1838 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 SPAARA0A1B0GVQ0 90 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 ZNF729A6NN14 1252 aaPredicted RBP10.24□□□□□ -0.77
UBR4-205ENST00000417040 TFF1P04155 84 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 JOSD1Q15040 202 aaPredicted RBP10.24□□□□□ -0.77
UBR4-205ENST00000417040 TMEM170BQ5T4T1 132 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 SAMD13Q5VXD3 122 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 FAM169BQ8N8A8 192 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 SYT8Q8NBV8 401 aa10.24□□□□□ -0.77
UBR4-205ENST00000417040 CKAP5Q14008 2032 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 GNG5P63218 68 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 EBLN2Q6P2I7 272 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 WFDC1Q9HC57 220 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 CLDN16Q9Y5I7 305 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 TMEM56-RWDD3S4R434 201 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 C17orf98A8MV24 154 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 CD55P08174 381 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 RPL23P62829 140 aaKnown RBP10.23□□□□□ -0.77
UBR4-205ENST00000417040 CCL20P78556 96 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 PSG9Q00887 426 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 LY6EQ16553 131 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 ATP1A1-AS1Q5TC04 95 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 CYP2G1PQ6ZSU1 146 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 MS4A5Q9H3V2 200 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 TRIP12Q14669 1992 aaPredicted RBP10.23□□□□□ -0.77
UBR4-205ENST00000417040 GPX1P07203 203 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 A0A1B0GV72 72 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 APOMO95445 188 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 IGHMP01871 453 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 CDCP2Q5VXM1 449 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 PRELID3AQ96N28 172 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 TXNDC17Q9BRA2 123 aa10.23□□□□□ -0.77
UBR4-205ENST00000417040 FAM90A26D6RGX4 464 aa10.22□□□□□ -0.77
UBR4-205ENST00000417040 TBR1Q16650 682 aa10.22□□□□□ -0.77
UBR4-205ENST00000417040 FAM201AQ5SY85 155 aa10.22□□□□□ -0.77
UBR4-205ENST00000417040 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.22□□□□□ -0.77
UBR4-205ENST00000417040 C10orf126Q8N4M7 172 aa10.22□□□□□ -0.77
UBR4-205ENST00000417040 TMEM54Q969K7 222 aa10.22□□□□□ -0.77
UBR4-205ENST00000417040 ATAD5Q96QE3 1844 aa10.22□□□□□ -0.77
UBR4-205ENST00000417040 hCG_38984A0A1B0GV85 526 aa10.22□□□□□ -0.77
UBR4-205ENST00000417040 C9orf172C9J069 976 aa10.22□□□□□ -0.77
UBR4-205ENST00000417040 TMEM95Q3KNT9 176 aa10.22□□□□□ -0.77
UBR4-205ENST00000417040 COL11A1P12107 1806 aaPredicted RBP10.22□□□□□ -0.77
UBR4-205ENST00000417040 NDUFS6O75380 124 aaKnown RBP10.22□□□□□ -0.77
UBR4-205ENST00000417040 C1orf185Q5T7R7 199 aa10.22□□□□□ -0.77
UBR4-205ENST00000417040 CXCL1P09341 107 aa10.22□□□□□ -0.77
UBR4-205ENST00000417040 ZNF658BQ4V348 819 aaPredicted RBP10.22□□□□□ -0.77
UBR4-205ENST00000417040 TCF24Q7RTU0 167 aa10.22□□□□□ -0.77
UBR4-205ENST00000417040 NRN1Q9NPD7 142 aa10.22□□□□□ -0.77
UBR4-205ENST00000417040 PSMB11A5LHX3 300 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 C9JCJ5 164 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 HIST1H2BKO60814 126 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 HIST1H2BJP06899 126 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 HIST1H2BOP23527 126 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 HIST1H2BBP33778 126 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 HIST1H2BDP58876 126 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 HIST1H2BCP62807 126 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 HIST2H2BEQ16778 126 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.21□□□□□ -0.77
UBR4-205ENST00000417040 LY6G6FQ5SQ64 297 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 WDR82Q6UXN9 313 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 OR13C6PQ8NH95 151 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 OR5P3Q8WZ94 311 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 HIST1H2BHQ93079 126 aa10.21□□□□□ -0.77
UBR4-205ENST00000417040 HIST1H2BNQ99877 126 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms