RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 CRADDP78560 199 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 COL10A1Q03692 680 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 SRSF4Q08170 494 aaKnown RBP4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 ZFP69Q49AA0 526 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 SCGB2B2Q4G0G5 96 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 ORMDL2Q53FV1 153 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 TNFAIP8L3Q5GJ75 292 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 ADAMTSL4-AS1Q5T5F5 129 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 ZNF773Q6PK81 442 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 C19orf48Q6RUI8 117 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 C2orf66Q6UXQ4 117 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 OR52P1PQ8NH57 321 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 SCGB1C1Q8TD33 95 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 NARS2Q96I59 477 aaKnown RBP4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 TMEM101Q96IK0 257 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 YPEL4Q96NS1 127 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 IP6K3Q96PC2 410 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 ATOH8Q96SQ7 321 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 ZNF649Q9BS31 505 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 C1QTNF4Q9BXJ3 329 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 SAMD10Q9BYL1 202 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 COMMD5Q9GZQ3 224 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 GPR84Q9NQS5 396 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 DHCR7Q9UBM7 475 aaKnown RBP4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 PYGO1Q9Y3Y4 419 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 PRUNE2Q8WUY3 3088 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 NFASCO94856 1347 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 MYH10P35580 1976 aa4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 YLPM1P49750 1951 aaKnown RBP4.4□□□□□ -1.71
CBX1P3-201ENST00000413296 ZNF646O15015 1829 aaPredicted RBP4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 DNAH12Q6ZR08 3092 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 TMED7-TICAM2A0A0A6YYA0 188 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 ZNF705GA8MUZ8 300 aaPredicted RBP4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 H3BSA7 217 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 ZNF354AO60765 605 aaPredicted RBP4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 PPP1R3DO95685 299 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 ZNF30P17039 623 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 IL3RAP26951 378 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 CMPK1P30085 196 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 PPP1CCP36873 323 aaKnown RBP4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 THBS3P49746 956 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 DEFA3P59666 94 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 RAP1AP62834 184 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 HERVK_113P63121 156 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 PLCXD2Q0VAA5 305 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 TAF9Q16594 264 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 MORN2Q502X0 79 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 HAGHLQ6PII5 290 aaPredicted RBP4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 EXOC3-AS1Q8N2X6 119 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 ORAOV1Q8WV07 137 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 FRZBQ92765 325 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 NEUROG1Q92886 237 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 PGLYRP2Q96PD5 576 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 NMNAT3Q96T66 252 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 SYT15Q9BQS2 421 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 LXNQ9BS40 222 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 PDCD10Q9BUL8 212 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 OR2D2Q9H210 308 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 PTGES2Q9H7Z7 377 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 DHRS4-AS1Q9P1J3 65 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 NEUROG3Q9Y4Z2 214 aa4.39□□□□□ -1.71
CBX1P3-201ENST00000413296 DNASE2O00115 360 aaPredicted RBP4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 LGALS9O00182 355 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 TP53I11O14683 189 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 SLC22A1O15245 554 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 SRSF10O75494 262 aaKnown RBP4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 IFNA7P01567 189 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 ZNF20P17024 532 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 RPS4Y1P22090 263 aaKnown RBP4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 SRIP30626 198 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 OR10J1P30954 320 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 ATP5G3P48201 142 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 DSCR9P59020 149 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 TIMM10P62072 90 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 SELENOWP63302 87 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 MRPS10P82664 201 aaKnown RBP4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 TWIST1Q15672 202 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 C9orf57Q5W0N0 161 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 IGFL4Q6B9Z1 124 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 HSD17B13Q7Z5P4 300 aaPredicted RBP4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 ZNF584Q8IVC4 421 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 ADAT3Q96EY9 351 aaPredicted RBP4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 SMIM14Q96QK8 99 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 CACYBPQ9HB71 228 aaKnown RBP4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 ERG28Q9UKR5 140 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 PROCRQ9UNN8 238 aa4.38□□□□□ -1.71
CBX1P3-201ENST00000413296 PSME4Q14997 1843 aa4.37□□□□□ -1.71
CBX1P3-201ENST00000413296 IGLV8-61A0A075B6I0 122 aa4.37□□□□□ -1.71
CBX1P3-201ENST00000413296 TRAV4A0A0B4J268 109 aa4.37□□□□□ -1.71
CBX1P3-201ENST00000413296 IGHV1-69-2A0A0G2JMI3 117 aa4.37□□□□□ -1.71
CBX1P3-201ENST00000413296 A0A0X1KG70 313 aa4.37□□□□□ -1.71
CBX1P3-201ENST00000413296 DUXBA0A1W2PPF3 345 aa4.37□□□□□ -1.71
CBX1P3-201ENST00000413296 NDUFC2-KCTD14E9PQ53 114 aa4.37□□□□□ -1.71
CBX1P3-201ENST00000413296 GNG7O60262 68 aa4.37□□□□□ -1.71
CBX1P3-201ENST00000413296 PSG2P11465 335 aa4.37□□□□□ -1.71
CBX1P3-201ENST00000413296 IL1RNP18510 177 aa4.37□□□□□ -1.71
CBX1P3-201ENST00000413296 EVI2AP22794 236 aa4.37□□□□□ -1.71
CBX1P3-201ENST00000413296 PPIBP23284 216 aaKnown RBP4.37□□□□□ -1.71
CBX1P3-201ENST00000413296 GABRA3P34903 492 aa4.37□□□□□ -1.71
CBX1P3-201ENST00000413296 AKR1D1P51857 326 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms