RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 IGHV3-15A0A0B4J1V0 119 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 IGHV7-4-1A0A0J9YVY3 117 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 A0A1B0GVX0 72 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 A0A1W2PRG6 482 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 NCBP2LA6PVI3 153 aaKnown RBP1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CEACAM18A8MTB9 384 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TRAPPC2LH3BP13 241 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 GMDSO60547 372 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PLIN3O60664 434 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RBBP9O75884 186 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 KRT75O95678 551 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 IGHV1-46P01743 117 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RBP4P02753 201 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CD74P04233 296 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CD37P11049 281 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 NQO1P15559 274 aaKnown RBP1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CTRB1P17538 263 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 BRS3P32247 399 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PRSS3P35030 304 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CFHR2P36980 270 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MYCNOSP40205 109 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 IDH2P48735 452 aaKnown RBP1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 BCAP31P51572 246 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DYNLT3P51808 116 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RND2P52198 227 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TCTAP57738 103 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR2B8PP59922 312 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 FGF12P61328 243 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 NCALDP61601 193 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RPL23P62829 140 aaKnown RBP1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SLC35B1P78383 322 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SYCNQ0VAF6 134 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ST3GAL4Q11206 333 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DGCR6Q14129 220 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 LRRC75BQ2VPJ9 315 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CCDC153Q494R4 210 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ABCA11PQ4W5N1 156 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SLC35D2Q76EJ3 337 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CALHM3Q86XJ0 350 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SLC30A8Q8IWU4 369 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZNF101Q8IZC7 436 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 LGI3Q8N145 548 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZCCHC24Q8N2G6 241 aaKnown RBP1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZIC4Q8N9L1 334 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR8J2Q8NGG1 315 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RPS4Y2Q8TD47 263 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 KLF14Q8TD94 323 aaPredicted RBP1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MITD1Q8WV92 249 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RASSF5Q8WWW0 418 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CDS1Q92903 461 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MALSU1Q96EH3 234 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DUS3LQ96G46 650 aaKnown RBP1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RBP7Q96R05 134 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 EBPLQ9BY08 206 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 VCX3AQ9NNX9 186 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TMEM38BQ9NVV0 291 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 GLTPQ9NZD2 209 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SLC17A7Q9P2U7 560 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MTFP1Q9UDX5 166 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 FLVCR2Q9UPI3 526 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RFNGQ9Y644 331 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DYNC2H1Q8NCM8 4307 aaKnown RBP1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SNRNP200O75643 2136 aaKnown RBP1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MED12LQ86YW9 2145 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 IGLV2-18A0A075B6J9 118 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 A0A087WUJ7 227 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 A0A0J9YXV3 536 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 A0A0U1RQV1 116 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TCRBV4S1A1TA0A5B7 111 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 C5orf49A4QMS7 147 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR6C6A6NF89 314 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZNF850A8MQ14 1090 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 LYNX1G3V0Z9 82 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 H3BN98 237 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 K7EIL1 84 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 K7EMT4 169 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 NPFFO15130 113 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 NDUFB3O43676 98 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 GATCO43716 136 aaKnown RBP1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SERPINB7O75635 380 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 IGKV1D-16P01601 117 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MBP02144 154 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 APOC1P02654 83 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MT-ND4P03905 459 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SNRPAP09012 282 aaKnown RBP1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CST2P09228 141 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 LYNX1P0DP58 116 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PPIBP23284 216 aaKnown RBP1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CFL1P23528 166 aaKnown RBP1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 BMI1P35226 326 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 GGT2P36268 569 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MAP2K4P45985 399 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RPS5P46782 204 aaKnown RBP1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 NUDT2P50583 147 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TAS2R31P59538 309 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DNAJB13P59910 316 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 BTN1A1Q13410 526 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MADCAM1Q13477 382 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZNF266Q14584 549 aa1.6□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TOMM34Q15785 309 aaPredicted RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms