RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 DEDD2Q8WXF8 326 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 RAB40CQ96S21 281 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 S1PR3Q99500 378 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 CMSS1Q9BQ75 279 aaKnown RBP3.21□□□□□ -1.9
CLK1-203ENST00000409769 TMEM246Q9BRR3 403 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 HDHD3Q9BSH5 251 aaPredicted RBP3.21□□□□□ -1.9
CLK1-203ENST00000409769 CHST6Q9GZX3 395 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 PPA2Q9H2U2 334 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 NCOR1P1Q9H4R4 102 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 GLS2Q9UI32 602 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 TBC1D24Q9ULP9 559 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 POLQO75417 2590 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 CSMD2Q7Z408 3487 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 IGKV1D-8A0A087WSZ0 117 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 A0A096LNT2 108 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 ISPDA4D126 451 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 MEIS3P1A6NDR6 274 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 CEACAM18A8MTB9 384 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 MCRIP1C9JLW8 97 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 LYRM1O43325 122 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 RBBP9O75884 186 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 ECDO95905 644 aaPredicted RBP3.2□□□□□ -1.9
CLK1-203ENST00000409769 MT-ND4P03905 459 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 WNT2P09544 360 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 ZNF735P0CB33 412 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 CGB3P0DN86 165 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 CGB7P0DN87 165 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 RCVRNP35243 200 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 CBX5P45973 191 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 GABRA2P47869 451 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 ATP5J2P56134 94 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 TAS2R19P59542 299 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 ACTBP60709 375 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 ACTG1P63261 375 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 ASAH1Q13510 395 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 ARFRP1Q13795 201 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 ATXN7L3Q14CW9 347 aaPredicted RBP3.2□□□□□ -1.9
CLK1-203ENST00000409769 HERPUD1Q15011 391 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 HMGN3Q15651 99 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 GRK1Q15835 563 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 KCNJ8Q15842 424 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 PAN3Q58A45 887 aaKnown RBP3.2□□□□□ -1.9
CLK1-203ENST00000409769 VAX1Q5SQQ9 334 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 LEMD1Q68G75 181 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 ZNF660Q6AZW8 331 aaPredicted RBP3.2□□□□□ -1.9
CLK1-203ENST00000409769 OR52W1Q6IF63 320 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 MOB1BQ7L9L4 216 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 TRAPPC6BQ86SZ2 158 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 LRRC75A-AS1Q8N1F1 130 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 TOMM5Q8N4H5 51 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 ZNF525Q8N782 197 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 FAM216BQ8N7L0 139 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 DEFB108BQ8NET1 73 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 OR5D13Q8NGL4 314 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 OR4C16Q8NGL9 310 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 C10orf105Q8TEF2 133 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 CCL13Q99616 98 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 C7orf50Q9BRJ6 194 aaKnown RBP3.2□□□□□ -1.9
CLK1-203ENST00000409769 BPESC1Q9GZL8 116 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 TOLLIPQ9H0E2 274 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 LINC00574Q9H8X3 128 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 PATZ1Q9HBE1 687 aaKnown RBP3.2□□□□□ -1.9
CLK1-203ENST00000409769 HRASLSQ9HDD0 168 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 C12orf4Q9NQ89 552 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 ABCB10Q9NRK6 738 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 TAS2R8Q9NYW2 309 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 ZNF230Q9UIE0 474 aaPredicted RBP3.2□□□□□ -1.9
CLK1-203ENST00000409769 MGAT4AQ9UM21 535 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 ZNF469Q96JG9 3925 aaPredicted RBP3.2□□□□□ -1.9
CLK1-203ENST00000409769 NAV2Q8IVL1 2488 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 VPS13CQ709C8 3753 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 GCN1Q92616 2671 aaKnown RBP3.2□□□□□ -1.9
CLK1-203ENST00000409769 CSMD1Q96PZ7 3565 aa3.2□□□□□ -1.9
CLK1-203ENST00000409769 ABCA1O95477 2261 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 LRBAP50851 2863 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 IGKV1-6A0A0C4DH72 117 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 TMEM30CPA0ZSE6 113 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 ODAMA1E959 279 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 NAP1L6A6NFF2 107 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 ZNF736B4DX44 427 aaPredicted RBP3.19□□□□□ -1.9
CLK1-203ENST00000409769 C12orf77C9JDV5 145 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 C15orf65H3BRN8 121 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 NDUFS8O00217 210 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 RTL8CO15255 209 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 FABP7O15540 132 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 PPIHO43447 177 aaKnown RBP3.19□□□□□ -1.9
CLK1-203ENST00000409769 NDUFB3O43676 98 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 DIRAS3O95661 229 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 CD3DP04234 171 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 SCTP09683 121 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 GSTT2P0CG29 244 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 GSTT2BP0CG30 244 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 AKAIN1P0CW23 69 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 RCC1P18754 421 aaPredicted RBP3.19□□□□□ -1.9
CLK1-203ENST00000409769 TBPP20226 339 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 HLA-DMAP28067 261 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 SLC6A1P30531 599 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 HRH1P35367 487 aa3.19□□□□□ -1.9
CLK1-203ENST00000409769 GPR6P46095 362 aaPredicted RBP3.19□□□□□ -1.9
CLK1-203ENST00000409769 DLX6P56179 175 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms