RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ATP1A1-AS1Q5TC04 95 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 MIC13Q5XKP0 118 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 TCTEX1D1Q8N7M0 179 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 ABHD3Q8WU67 409 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 ORAOV1Q8WV07 137 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 COX11Q9Y6N1 276 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 LOC105371242A0A075B767 164 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 RHBDL1O75783 438 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 ACTL6BO94805 426 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 MGST1P10620 155 aaKnown RBP14.3□□□□□ -0.12
PTPRA-205ENST00000399903 C6orf15Q6UXA7 325 aaPredicted RBP14.3□□□□□ -0.12
PTPRA-205ENST00000399903 OR2D2Q9H210 308 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 SLC35D1Q9NTN3 355 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 TIMM9Q9Y5J7 89 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 KIAA1549Q9HCM3 1950 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 TRAV24A0A0B4J272 114 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 FAM166BA8MTA8 275 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 ITGB1BP1O14713 200 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 NGFP01138 241 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 TSPOP30536 169 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 ACSF3Q4G176 576 aaPredicted RBP14.3□□□□□ -0.12
PTPRA-205ENST00000399903 KLHDC1Q8N7A1 406 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 IL36BQ9NZH7 164 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 C9orf172C9J069 976 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 CDKN1BP46527 198 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 C3AR1Q16581 482 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 RNASE7Q9H1E1 156 aaKnown RBP14.3□□□□□ -0.12
PTPRA-205ENST00000399903 DLL3Q9NYJ7 618 aa14.3□□□□□ -0.12
PTPRA-205ENST00000399903 TNRC6BQ9UPQ9 1833 aaKnown RBP14.29□□□□□ -0.12
PTPRA-205ENST00000399903 BPIFB3P59826 476 aa14.29□□□□□ -0.12
PTPRA-205ENST00000399903 PSG7Q13046 419 aa14.29□□□□□ -0.12
PTPRA-205ENST00000399903 STUMQ69YW2 141 aa14.29□□□□□ -0.12
PTPRA-205ENST00000399903 H2BFWTQ7Z2G1 175 aa14.29□□□□□ -0.12
PTPRA-205ENST00000399903 KCNIP2Q9NS61 270 aa14.29□□□□□ -0.12
PTPRA-205ENST00000399903 CLCF1Q9UBD9 225 aa14.29□□□□□ -0.12
PTPRA-205ENST00000399903 DCHS1Q96JQ0 3298 aa14.29□□□□□ -0.12
PTPRA-205ENST00000399903 OTOGLQ3ZCN5 2332 aa14.29□□□□□ -0.12
PTPRA-205ENST00000399903 H0Y8G0 127 aa14.29□□□□□ -0.12
PTPRA-205ENST00000399903 ZNF83P51522 516 aa14.29□□□□□ -0.12
PTPRA-205ENST00000399903 A0A1W2PS18 150 aa14.28□□□□□ -0.12
PTPRA-205ENST00000399903 CD99P14209 185 aa14.28□□□□□ -0.12
PTPRA-205ENST00000399903 AARDQ4LEZ3 155 aa14.28□□□□□ -0.12
PTPRA-205ENST00000399903 REPIN1Q9BWE0 567 aaKnown RBP14.28□□□□□ -0.12
PTPRA-205ENST00000399903 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.28□□□□□ -0.12
PTPRA-205ENST00000399903 K7EN84 100 aa14.28□□□□□ -0.12
PTPRA-205ENST00000399903 ZC2HC1AQ96GY0 325 aa14.28□□□□□ -0.12
PTPRA-205ENST00000399903 DEFB108AA8MXU0 73 aa14.28□□□□□ -0.12
PTPRA-205ENST00000399903 M0R296 226 aa14.28□□□□□ -0.12
PTPRA-205ENST00000399903 CA1P00915 261 aaPredicted RBP14.28□□□□□ -0.12
PTPRA-205ENST00000399903 IGLV2-14P01704 120 aa14.28□□□□□ -0.12
PTPRA-205ENST00000399903 SP9P0CG40 484 aa14.28□□□□□ -0.12
PTPRA-205ENST00000399903 RNPS1Q15287 305 aaKnown RBP14.28□□□□□ -0.12
PTPRA-205ENST00000399903 IGHV3-43A0A0B4J1X8 118 aa14.27□□□□□ -0.12
PTPRA-205ENST00000399903 IGHV3-43DP0DP04 118 aa14.27□□□□□ -0.12
PTPRA-205ENST00000399903 TNFSF4P23510 183 aa14.27□□□□□ -0.12
PTPRA-205ENST00000399903 CEBPDP49716 269 aaPredicted RBP14.27□□□□□ -0.12
PTPRA-205ENST00000399903 RPL30P62888 115 aaKnown RBP14.27□□□□□ -0.12
PTPRA-205ENST00000399903 PEAR1Q5VY43 1037 aaPredicted RBP14.27□□□□□ -0.12
PTPRA-205ENST00000399903 NHLRC2Q8NBF2 726 aa14.27□□□□□ -0.12
PTPRA-205ENST00000399903 ZNF439Q8NDP4 499 aa14.27□□□□□ -0.12
PTPRA-205ENST00000399903 OR10D3Q8NH80 312 aa14.27□□□□□ -0.12
PTPRA-205ENST00000399903 LRRC30A6NM36 301 aa14.27□□□□□ -0.13
PTPRA-205ENST00000399903 IGHV3-13P01766 116 aa14.27□□□□□ -0.13
PTPRA-205ENST00000399903 IGHV3-7P01780 117 aa14.27□□□□□ -0.13
PTPRA-205ENST00000399903 CD1BP29016 333 aa14.27□□□□□ -0.13
PTPRA-205ENST00000399903 Q6ZSR3 168 aa14.27□□□□□ -0.13
PTPRA-205ENST00000399903 WASHC3Q9Y3C0 194 aa14.27□□□□□ -0.13
PTPRA-205ENST00000399903 YTHDF2Q9Y5A9 579 aaKnown RBP14.27□□□□□ -0.13
PTPRA-205ENST00000399903 RRHO14718 337 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 PSG1P11464 419 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 RAC2P15153 192 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 CYB561P49447 251 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 OR4A47Q6IF82 309 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 FOXL2NBQ6ZUU3 175 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 MED12LQ86YW9 2145 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 PCSK5Q92824 1860 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 C17orf98A8MV24 154 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 TMPRSS2O15393 492 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 HSBP1O75506 76 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 RAC1P63000 192 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 HOXA4Q00056 320 aaPredicted RBP14.26□□□□□ -0.13
PTPRA-205ENST00000399903 SSPNQ14714 243 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 SPATA31B1PQ5VZV4 182 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 Q8N976 141 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 RFESDQ8TAC1 157 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 HEYLQ9NQ87 328 aaPredicted RBP14.26□□□□□ -0.13
PTPRA-205ENST00000399903 CTRLP40313 264 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 PCBD1P61457 104 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 GMPPAQ96IJ6 420 aaPredicted RBP14.26□□□□□ -0.13
PTPRA-205ENST00000399903 KCNS1Q96KK3 526 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 ARL2-SNX15V9GYD0 113 aa14.26□□□□□ -0.13
PTPRA-205ENST00000399903 ZNF324O75467 553 aaPredicted RBP14.25□□□□□ -0.13
PTPRA-205ENST00000399903 RNASEKQ6P5S7 137 aaKnown RBP14.25□□□□□ -0.13
PTPRA-205ENST00000399903 SMIM15Q7Z3B0 74 aa14.25□□□□□ -0.13
PTPRA-205ENST00000399903 CLEC7AQ9BXN2 247 aa14.25□□□□□ -0.13
PTPRA-205ENST00000399903 PIGBOS1A0A0B4J2F0 54 aa14.25□□□□□ -0.13
PTPRA-205ENST00000399903 CA2P00918 260 aa14.25□□□□□ -0.13
PTPRA-205ENST00000399903 ACP1P24666 158 aa14.25□□□□□ -0.13
PTPRA-205ENST00000399903 B3GALT5-AS1P59052 145 aa14.25□□□□□ -0.13
PTPRA-205ENST00000399903 PQLC2Q6ZP29 291 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms