RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 C1QTNF9P0C862 333 aa17.76■□□□□ 0.43
SKI-201ENST00000378536 OTX1P32242 354 aaPredicted RBP17.76■□□□□ 0.43
SKI-201ENST00000378536 OR10G8Q8NGN5 311 aa17.76■□□□□ 0.43
SKI-201ENST00000378536 ANGPTL6Q8NI99 470 aa17.75■□□□□ 0.43
SKI-201ENST00000378536 FBXL15Q9H469 300 aa17.75■□□□□ 0.43
SKI-201ENST00000378536 AWAT1Q58HT5 328 aa17.75■□□□□ 0.43
SKI-201ENST00000378536 MORN2Q502X0 79 aa17.75■□□□□ 0.43
SKI-201ENST00000378536 P01737 135 aa17.75■□□□□ 0.43
SKI-201ENST00000378536 TMEM133Q9H2Q1 129 aa17.75■□□□□ 0.43
SKI-201ENST00000378536 SAA2-SAA4A0A096LPE2 208 aa17.74■□□□□ 0.43
SKI-201ENST00000378536 SAA2P0DJI9 122 aaPredicted RBP17.74■□□□□ 0.43
SKI-201ENST00000378536 BCL2P10415 239 aa17.74■□□□□ 0.43
SKI-201ENST00000378536 OR11H4Q8NGC9 324 aa17.74■□□□□ 0.43
SKI-201ENST00000378536 SUMO1P63165 101 aaKnown RBP17.74■□□□□ 0.43
SKI-201ENST00000378536 TMEM42Q69YG0 159 aa17.74■□□□□ 0.43
SKI-201ENST00000378536 IGKV3-15P01624 115 aa17.74■□□□□ 0.43
SKI-201ENST00000378536 COL8A1P27658 744 aa17.74■□□□□ 0.43
SKI-201ENST00000378536 Q5BKY6 102 aa17.74■□□□□ 0.43
SKI-201ENST00000378536 NHLRC3Q5JS37 347 aa17.74■□□□□ 0.43
SKI-201ENST00000378536 FAM24BQ8N5W8 94 aa17.74■□□□□ 0.43
SKI-201ENST00000378536 B4DEV8 164 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 TMEM204Q9BSN7 226 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 CA2P00918 260 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 RAB5AP20339 215 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 DLK1P80370 383 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 HLA-DRB5Q30154 266 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 OR5AU1Q8NGC0 362 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 RSPO3Q9BXY4 272 aaPredicted RBP17.73■□□□□ 0.43
SKI-201ENST00000378536 ZNF586Q9NXT0 402 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 IGKV1D-13A0A0B4J2D9 117 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 CFDP00746 253 aaPredicted RBP17.73■□□□□ 0.43
SKI-201ENST00000378536 IGKV1-13P0DP09 117 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 J3KRW8 73 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 WISP1O95388 367 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 MOSP00540 346 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 PLAUP00749 431 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 NAT1P18440 290 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 EFNA4P52798 201 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 EEF1AKMT3Q96AZ1 226 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 FAM210BQ96KR6 192 aa17.73■□□□□ 0.43
SKI-201ENST00000378536 C1QL1O75973 258 aa17.72■□□□□ 0.43
SKI-201ENST00000378536 EAF1Q96JC9 268 aaPredicted RBP17.72■□□□□ 0.43
SKI-201ENST00000378536 F5H697 171 aa17.72■□□□□ 0.43
SKI-201ENST00000378536 BPIFA4PQ86YQ2 179 aa17.72■□□□□ 0.43
SKI-201ENST00000378536 KIAA1324LA8MWY0 1029 aaPredicted RBP17.72■□□□□ 0.43
SKI-201ENST00000378536 ERVH48-1M5A8F1 160 aa17.72■□□□□ 0.43
SKI-201ENST00000378536 FCN1O00602 326 aa17.72■□□□□ 0.43
SKI-201ENST00000378536 SMDT1Q9H4I9 107 aa17.72■□□□□ 0.43
SKI-201ENST00000378536 DNAJC4Q9NNZ3 241 aa17.72■□□□□ 0.43
SKI-201ENST00000378536 ORM1P02763 201 aa17.72■□□□□ 0.43
SKI-201ENST00000378536 FAM106AQ4KMX7 169 aa17.72■□□□□ 0.43
SKI-201ENST00000378536 NCMAPQ5T1S8 102 aa17.72■□□□□ 0.43
SKI-201ENST00000378536 C20orf204Q6ZNR8 217 aa17.72■□□□□ 0.43
SKI-201ENST00000378536 FA2HQ7L5A8 372 aa17.72■□□□□ 0.43
SKI-201ENST00000378536 HIST1H1BP16401 226 aaKnown RBP17.71■□□□□ 0.43
SKI-201ENST00000378536 WDR73Q6P4I2 378 aa17.71■□□□□ 0.43
SKI-201ENST00000378536 PQLC2Q6ZP29 291 aa17.71■□□□□ 0.43
SKI-201ENST00000378536 CENPVQ7Z7K6 275 aaPredicted RBP17.71■□□□□ 0.43
SKI-201ENST00000378536 TMEM18Q96B42 140 aa17.71■□□□□ 0.43
SKI-201ENST00000378536 BTCP35070 178 aa17.71■□□□□ 0.43
SKI-201ENST00000378536 TMEM37Q8WXS4 190 aa17.71■□□□□ 0.43
SKI-201ENST00000378536 TMEM56-RWDD3S4R434 201 aa17.71■□□□□ 0.43
SKI-201ENST00000378536 H3BQ15 152 aa17.71■□□□□ 0.43
SKI-201ENST00000378536 FCGR2BP31994 310 aaPredicted RBP17.71■□□□□ 0.43
SKI-201ENST00000378536 NPIPB3Q92617 1050 aa17.71■□□□□ 0.43
SKI-201ENST00000378536 TMEM178BH3BS89 294 aa17.7■□□□□ 0.42
SKI-201ENST00000378536 LILRA1O75019 489 aa17.7■□□□□ 0.42
SKI-201ENST00000378536 SRSF7Q16629 238 aaKnown RBP eCLIP17.7■□□□□ 0.422e-10■□□□□ 10.8
SKI-201ENST00000378536 ZNF524Q96C55 264 aa17.7■□□□□ 0.42
SKI-201ENST00000378536 LDLRAD4O15165 306 aa17.7■□□□□ 0.42
SKI-201ENST00000378536 SLC31A2O15432 143 aa17.7■□□□□ 0.42
SKI-201ENST00000378536 SNRPCP09234 159 aaKnown RBP17.7■□□□□ 0.42
SKI-201ENST00000378536 STPG3Q8N7X2 389 aa17.7■□□□□ 0.42
SKI-201ENST00000378536 LDLRAD3Q86YD5 345 aa17.7■□□□□ 0.42
SKI-201ENST00000378536 NOL4LQ96MY1 436 aaPredicted RBP17.7■□□□□ 0.42
SKI-201ENST00000378536 DENND4CQ5VZ89 1909 aa17.7■□□□□ 0.42
SKI-201ENST00000378536 CAMPP49913 170 aa17.7■□□□□ 0.42
SKI-201ENST00000378536 HSBP1O75506 76 aa17.7■□□□□ 0.42
SKI-201ENST00000378536 DPRXA6NFQ7 191 aa17.69■□□□□ 0.42
SKI-201ENST00000378536 ZNF324BQ6AW86 544 aaPredicted RBP17.69■□□□□ 0.42
SKI-201ENST00000378536 HAX1O00165 279 aa17.69■□□□□ 0.42
SKI-201ENST00000378536 RBPMS2Q6ZRY4 209 aaKnown RBP17.69■□□□□ 0.42
SKI-201ENST00000378536 RPRMLQ8N4K4 120 aa17.69■□□□□ 0.42
SKI-201ENST00000378536 C16orf92Q96LL3 132 aa17.69■□□□□ 0.42
SKI-201ENST00000378536 IGKV1D-8A0A087WSZ0 117 aa17.69■□□□□ 0.42
SKI-201ENST00000378536 MPZP25189 248 aa17.69■□□□□ 0.42
SKI-201ENST00000378536 DSCR9P59020 149 aa17.69■□□□□ 0.42
SKI-201ENST00000378536 TPPP2P59282 170 aa17.69■□□□□ 0.42
SKI-201ENST00000378536 C5orf17Q8NAS9 161 aa17.69■□□□□ 0.42
SKI-201ENST00000378536 TXNDC17Q9BRA2 123 aa17.69■□□□□ 0.42
SKI-201ENST00000378536 NMBP08949 121 aa17.68■□□□□ 0.42
SKI-201ENST00000378536 ZNF735P0CB33 412 aa17.68■□□□□ 0.42
SKI-201ENST00000378536 TCL1AP56279 114 aa17.68■□□□□ 0.42
SKI-201ENST00000378536 HGFACQ04756 655 aa17.68■□□□□ 0.42
SKI-201ENST00000378536 RELQ04864 619 aaPredicted RBP17.68■□□□□ 0.42
SKI-201ENST00000378536 SIGIRRQ6IA17 410 aa17.68■□□□□ 0.42
SKI-201ENST00000378536 SH3BGRL3Q9H299 93 aa17.68■□□□□ 0.42
SKI-201ENST00000378536 PLXNB3Q9ULL4 1909 aa17.68■□□□□ 0.42
SKI-201ENST00000378536 PRB3Q04118 309 aaPredicted RBP17.68■□□□□ 0.42
SKI-201ENST00000378536 TUSC1Q2TAM9 212 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms