RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 NDUFB4O95168 129 aa20.93■□□□□ 0.94
C9orf40-201ENST00000376854 PDLIM3Q53GG5 364 aaPredicted RBP20.93■□□□□ 0.94
C9orf40-201ENST00000376854 ACTL10Q5JWF8 245 aa20.93■□□□□ 0.94
C9orf40-201ENST00000376854 ALKBH2Q6NS38 261 aa20.93■□□□□ 0.94
C9orf40-201ENST00000376854 GCSAMQ8N6F7 178 aa20.93■□□□□ 0.94
C9orf40-201ENST00000376854 MS4A5Q9H3V2 200 aa20.93■□□□□ 0.94
C9orf40-201ENST00000376854 FUT9Q9Y231 359 aa20.93■□□□□ 0.94
C9orf40-201ENST00000376854 SVILO95425 2214 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 GALR2O43603 387 aaPredicted RBP20.92■□□□□ 0.94
C9orf40-201ENST00000376854 GFRA3O60609 400 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 DEFB109BQ30KR1 87 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 OR5R1Q8NH85 324 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 SDSLQ96GA7 329 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 ACY3Q96HD9 319 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 MGST2Q99735 147 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 TMEM140Q9NV12 185 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 AURKAIP1Q9NWT8 199 aaPredicted RBP20.92■□□□□ 0.94
C9orf40-201ENST00000376854 PRSS46E5RG02 174 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 F2RL2O00254 374 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 TYMSP04818 313 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 PKIAP61925 76 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 ABHD12Q8N2K0 398 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 LINC00469Q8N7U9 141 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 TMEM37Q8WXS4 190 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 DERL1Q9BUN8 251 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 DKK4Q9UBT3 224 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 SLC25A15Q9Y619 301 aa20.92■□□□□ 0.94
C9orf40-201ENST00000376854 DVL1O14640 695 aa20.91■□□□□ 0.94
C9orf40-201ENST00000376854 TMPRSS2O15393 492 aa20.91■□□□□ 0.94
C9orf40-201ENST00000376854 CGAP01215 116 aa20.91■□□□□ 0.94
C9orf40-201ENST00000376854 GPX4P36969 197 aaPredicted RBP20.91■□□□□ 0.94
C9orf40-201ENST00000376854 CISD2Q8N5K1 135 aaKnown RBP20.91■□□□□ 0.94
C9orf40-201ENST00000376854 RNASEH2CQ8TDP1 164 aaKnown RBP20.91■□□□□ 0.94
C9orf40-201ENST00000376854 RHOVQ96L33 236 aa20.91■□□□□ 0.94
C9orf40-201ENST00000376854 PXMP4Q9Y6I8 212 aa20.91■□□□□ 0.94
C9orf40-201ENST00000376854 AHRRA9YTQ3 701 aa20.9■□□□□ 0.94
C9orf40-201ENST00000376854 F6UZH7 168 aa20.9■□□□□ 0.94
C9orf40-201ENST00000376854 NUBP1P53384 320 aa20.9■□□□□ 0.94
C9orf40-201ENST00000376854 SPRNQ5BIV9 151 aa20.9■□□□□ 0.94
C9orf40-201ENST00000376854 GGTLC1Q9BX51 225 aa20.9■□□□□ 0.94
C9orf40-201ENST00000376854 CACNA1GO43497 2377 aa20.9■□□□□ 0.94
C9orf40-201ENST00000376854 ARL14EPLP0DKL9 152 aa20.9■□□□□ 0.94
C9orf40-201ENST00000376854 CFHR2P36980 270 aa20.9■□□□□ 0.94
C9orf40-201ENST00000376854 TMPRSS3P57727 454 aa20.9■□□□□ 0.94
C9orf40-201ENST00000376854 JOSD1Q15040 202 aaPredicted RBP20.9■□□□□ 0.94
C9orf40-201ENST00000376854 FAM78BQ5VT40 261 aa20.9■□□□□ 0.94
C9orf40-201ENST00000376854 MIC13Q5XKP0 118 aa20.9■□□□□ 0.94
C9orf40-201ENST00000376854 OR2V2Q96R30 315 aa20.9■□□□□ 0.94
C9orf40-201ENST00000376854 CALYQ9NYX4 217 aa20.9■□□□□ 0.94
C9orf40-201ENST00000376854 SLC31A2O15432 143 aa20.89■□□□□ 0.94
C9orf40-201ENST00000376854 CD99P14209 185 aa20.89■□□□□ 0.94
C9orf40-201ENST00000376854 KIR2DS2P43631 304 aa20.89■□□□□ 0.94
C9orf40-201ENST00000376854 ZNF83P51522 516 aa20.89■□□□□ 0.94
C9orf40-201ENST00000376854 MOGAT3Q86VF5 341 aa20.89■□□□□ 0.94
C9orf40-201ENST00000376854 TCF19Q9Y242 345 aa20.89■□□□□ 0.94
C9orf40-201ENST00000376854 INTS1Q8N201 2190 aaKnown RBP20.89■□□□□ 0.93
C9orf40-201ENST00000376854 PDLIM4P50479 330 aa20.89■□□□□ 0.93
C9orf40-201ENST00000376854 FAM169BQ8N8A8 192 aa20.89■□□□□ 0.93
C9orf40-201ENST00000376854 PRO1933Q9H354 126 aa20.89■□□□□ 0.93
C9orf40-201ENST00000376854 TSTD3H0UI37 97 aa20.88■□□□□ 0.93
C9orf40-201ENST00000376854 LCN2P80188 198 aa20.88■□□□□ 0.93
C9orf40-201ENST00000376854 C1orf229Q6ZS94 237 aaPredicted RBP20.88■□□□□ 0.93
C9orf40-201ENST00000376854 LEAP2Q969E1 77 aa20.88■□□□□ 0.93
C9orf40-201ENST00000376854 STAG3L2P0CL84 134 aa20.88■□□□□ 0.93
C9orf40-201ENST00000376854 STAG3L3P0CL85 134 aa20.88■□□□□ 0.93
C9orf40-201ENST00000376854 GZMBP10144 247 aa20.88■□□□□ 0.93
C9orf40-201ENST00000376854 UTF1Q5T230 341 aa20.88■□□□□ 0.93
C9orf40-201ENST00000376854 OR4S2Q8NH73 311 aa20.88■□□□□ 0.93
C9orf40-201ENST00000376854 DDB2Q92466 427 aa20.88■□□□□ 0.93
C9orf40-201ENST00000376854 CXorf1O96002 111 aa20.87■□□□□ 0.93
C9orf40-201ENST00000376854 C1QTNF9P0C862 333 aa20.87■□□□□ 0.93
C9orf40-201ENST00000376854 IL3RAP26951 378 aa20.87■□□□□ 0.93
C9orf40-201ENST00000376854 ZNF114Q8NC26 417 aa20.87■□□□□ 0.93
C9orf40-201ENST00000376854 C14orf144Q96I85 54 aa20.87■□□□□ 0.93
C9orf40-201ENST00000376854 PGPEP1LA6NFU8 196 aa20.87■□□□□ 0.93
C9orf40-201ENST00000376854 TRGV8A0A0C4DH27 118 aa20.86■□□□□ 0.93
C9orf40-201ENST00000376854 M0R1B8 84 aa20.86■□□□□ 0.93
C9orf40-201ENST00000376854 DDTP30046 118 aa20.86■□□□□ 0.93
C9orf40-201ENST00000376854 SSMEM1Q8WWF3 244 aa20.86■□□□□ 0.93
C9orf40-201ENST00000376854 TXNDC17Q9BRA2 123 aa20.86■□□□□ 0.93
C9orf40-201ENST00000376854 RAB7AP51149 207 aa20.86■□□□□ 0.93
C9orf40-201ENST00000376854 PRSS8Q16651 343 aa20.86■□□□□ 0.93
C9orf40-201ENST00000376854 SEM1Q6ZVN7 128 aa20.86■□□□□ 0.93
C9orf40-201ENST00000376854 TMEM204Q9BSN7 226 aa20.86■□□□□ 0.93
C9orf40-201ENST00000376854 NPVFQ9HCQ7 196 aa20.86■□□□□ 0.93
C9orf40-201ENST00000376854 C15orf61A6NNL5 157 aa20.85■□□□□ 0.93
C9orf40-201ENST00000376854 SPRY3O43610 288 aa20.85■□□□□ 0.93
C9orf40-201ENST00000376854 C1orf159Q96HA4 380 aa20.85■□□□□ 0.93
C9orf40-201ENST00000376854 LSM4Q9Y4Z0 139 aaKnown RBP20.85■□□□□ 0.93
C9orf40-201ENST00000376854 HCFC1P51610 2035 aa20.85■□□□□ 0.93
C9orf40-201ENST00000376854 SELLP14151 372 aa20.84■□□□□ 0.93
C9orf40-201ENST00000376854 C17orf58Q2M2W7 97 aa20.84■□□□□ 0.93
C9orf40-201ENST00000376854 VHLLQ6RSH7 139 aa20.84■□□□□ 0.93
C9orf40-201ENST00000376854 A0A0U1RQK1 487 aa20.84■□□□□ 0.93
C9orf40-201ENST00000376854 ZNF320A2RRD8 509 aa20.84■□□□□ 0.93
C9orf40-201ENST00000376854 LHBP01229 141 aa20.84■□□□□ 0.93
C9orf40-201ENST00000376854 CGB3P0DN86 165 aa20.84■□□□□ 0.93
C9orf40-201ENST00000376854 CGB7P0DN87 165 aa20.84■□□□□ 0.93
C9orf40-201ENST00000376854 KLF3P57682 345 aaPredicted RBP20.84■□□□□ 0.93
C9orf40-201ENST00000376854 CT45A1Q5HYN5 189 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 451.1 ms