RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SSTR5P35346 364 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 CTRLP40313 264 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 RPEL1Q2QD12 228 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 KIAA1644Q3SXP7 199 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 SPATA45Q537H7 98 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 Q6ZR03 302 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 OR4B1Q8NGF8 309 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 RFESDQ8TAC1 157 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 PHF7Q9BWX1 381 aaPredicted RBP13.72□□□□□ -0.21
TRIM39-201ENST00000376656 BOKQ9UMX3 212 aaPredicted RBP13.72□□□□□ -0.21
TRIM39-201ENST00000376656 PSG11Q9UQ72 335 aa13.72□□□□□ -0.21
TRIM39-201ENST00000376656 PCSK5Q92824 1860 aa13.71□□□□□ -0.21
TRIM39-201ENST00000376656 OOEPA6NGQ2 149 aa13.71□□□□□ -0.21
TRIM39-201ENST00000376656 CXorf67Q86X51 503 aaPredicted RBP13.71□□□□□ -0.21
TRIM39-201ENST00000376656 COQ2Q96H96 371 aa13.71□□□□□ -0.21
TRIM39-201ENST00000376656 SEPSECSQ9HD40 501 aaKnown RBP13.71□□□□□ -0.21
TRIM39-201ENST00000376656 ZNF586Q9NXT0 402 aa13.71□□□□□ -0.21
TRIM39-201ENST00000376656 MPDU1O75352 247 aa13.71□□□□□ -0.21
TRIM39-201ENST00000376656 FOXH1O75593 365 aa13.71□□□□□ -0.21
TRIM39-201ENST00000376656 STPG4Q8N801 248 aa13.71□□□□□ -0.21
TRIM39-201ENST00000376656 EAF1Q96JC9 268 aaPredicted RBP13.71□□□□□ -0.21
TRIM39-201ENST00000376656 SLC35E1Q96K37 410 aa13.71□□□□□ -0.21
TRIM39-201ENST00000376656 RNF2Q99496 336 aa13.71□□□□□ -0.21
TRIM39-201ENST00000376656 ZNF703Q9H7S9 590 aaPredicted RBP13.71□□□□□ -0.21
TRIM39-201ENST00000376656 V9GYV3 84 aa13.71□□□□□ -0.21
TRIM39-201ENST00000376656 GABRA2P47869 451 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 ZNF826PQ6ZT77 177 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 C1orf174Q8IYL3 243 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 ARL6IP6Q8N6S5 226 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 C1orf159Q96HA4 380 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 RCHY1Q96PM5 261 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 NRN1Q9NPD7 142 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 FOXJ2Q9P0K8 574 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 K7ESF4 209 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 CELA3BP08861 270 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 OR1C1Q15619 314 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 HEYLQ9NQ87 328 aaPredicted RBP13.7□□□□□ -0.22
TRIM39-201ENST00000376656 PTPRBP23467 1997 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 TET2Q6N021 2002 aaPredicted RBP13.7□□□□□ -0.22
TRIM39-201ENST00000376656 DMDP11532 3685 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 A8MXE2 369 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 PRSS46E5RG02 174 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 NDUFB8O95169 186 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 PMCHP20382 165 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 ZNF766Q5HY98 468 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 LYSMD4Q5XG99 296 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 VKORC1L1Q8N0U8 176 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 ABHD12Q8N2K0 398 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 PLPPR2Q96GM1 343 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 SFXN3Q9BWM7 321 aa13.7□□□□□ -0.22
TRIM39-201ENST00000376656 MAGEA5P43359 124 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 AMTP48728 403 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 SUMO1P63165 101 aaKnown RBP13.69□□□□□ -0.22
TRIM39-201ENST00000376656 SLC35B1P78383 322 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 HTD2P86397 168 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 FOXF2Q12947 444 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 LTC4SQ16873 150 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 TCTEX1D1Q8N7M0 179 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 NAT8BQ9UHF3 227 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 SLC45A2Q9UMX9 530 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 PRAMEF5Q5TYX0 476 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 PRAMEF6Q5VXH4 476 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 FBXW9Q5XUX1 488 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 SLC35E4Q6ICL7 350 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 GNB1LQ9BYB4 327 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 LOXL2Q9Y4K0 774 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 FCGR3BO75015 233 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 EFNB3Q15768 340 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 Q8TCH9 128 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 STARD4Q96DR4 205 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 HSD17B10Q99714 261 aaKnown RBP13.69□□□□□ -0.22
TRIM39-201ENST00000376656 FAM234AQ9H0X4 552 aa13.69□□□□□ -0.22
TRIM39-201ENST00000376656 YLPM1P49750 1951 aaKnown RBP13.68□□□□□ -0.22
TRIM39-201ENST00000376656 OR13A1Q8NGR1 328 aa13.68□□□□□ -0.22
TRIM39-201ENST00000376656 C11orf52Q96A22 123 aa13.68□□□□□ -0.22
TRIM39-201ENST00000376656 TRGV10A0A0A0MS01 117 aa13.68□□□□□ -0.22
TRIM39-201ENST00000376656 A0A1W2PS18 150 aa13.68□□□□□ -0.22
TRIM39-201ENST00000376656 PRSS47A8MTI9 375 aa13.68□□□□□ -0.22
TRIM39-201ENST00000376656 C9JCJ5 164 aa13.68□□□□□ -0.22
TRIM39-201ENST00000376656 TDGF1P13385 188 aa13.68□□□□□ -0.22
TRIM39-201ENST00000376656 IGFBP4P22692 258 aa13.68□□□□□ -0.22
TRIM39-201ENST00000376656 VDAC2P45880 294 aaPredicted RBP13.68□□□□□ -0.22
TRIM39-201ENST00000376656 BPIFB3P59826 476 aa13.68□□□□□ -0.22
TRIM39-201ENST00000376656 DCAF12Q5T6F0 453 aa13.68□□□□□ -0.22
TRIM39-201ENST00000376656 UHRF2Q96PU4 802 aa13.68□□□□□ -0.22
TRIM39-201ENST00000376656 DCTN5Q9BTE1 182 aa13.68□□□□□ -0.22
TRIM39-201ENST00000376656 METRNQ9UJH8 293 aa13.68□□□□□ -0.22
TRIM39-201ENST00000376656 TRAV3A0A0B4J244 114 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 PROP1O75360 226 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 HYPMO75409 117 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 BCL2L2Q92843 193 aaPredicted RBP13.67□□□□□ -0.22
TRIM39-201ENST00000376656 TRBV9A0A0B4J1U6 114 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 GFRA3O60609 400 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 SMPD2O60906 423 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 CGAP01215 116 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 IGLC2P0DOY2 106 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 IGLC3P0DOY3 106 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 CXCL12P48061 93 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 ZNF83P51522 516 aa13.67□□□□□ -0.22
TRIM39-201ENST00000376656 Q6ZN92 141 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms