RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 TMPRSS5Q9H3S3 457 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 CCL28Q9NRJ3 127 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 MTCH1Q9NZJ7 389 aa8.54□□□□□ -1.04
COL5A1-202ENST00000371820 IGHV2-70DA0A0C4DH43 119 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 IGSF23A1L1A6 192 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 OOEPA6NGQ2 149 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 HSD17B6O14756 317 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 SIGLEC5O15389 551 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 TXNL1O43396 289 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 SYNGR2O43760 224 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 ENSAO43768 121 aaKnown RBP8.53□□□□□ -1.04
COL5A1-202ENST00000371820 SSSCA1O60232 199 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 FSHBP01225 129 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 LIPFP07098 398 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 SRP19P09132 144 aaKnown RBP8.53□□□□□ -1.04
COL5A1-202ENST00000371820 COMPP49747 757 aaPredicted RBP8.53□□□□□ -1.04
COL5A1-202ENST00000371820 B2MP61769 119 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 SNRPEP62304 92 aaKnown RBP8.53□□□□□ -1.04
COL5A1-202ENST00000371820 CATR1Q13166 79 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 DMRTC1Q5HYR2 192 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 KRBOX4Q5JUW0 171 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 FAM201AQ5SY85 155 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 BRICD5Q6PL45 260 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 ZNF429Q86V71 674 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 CIB3Q96Q77 187 aaPredicted RBP8.53□□□□□ -1.04
COL5A1-202ENST00000371820 ZNF251Q9BRH9 671 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 TOLLIPQ9H0E2 274 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 SEBOXQ9HB31 216 aaPredicted RBP8.53□□□□□ -1.04
COL5A1-202ENST00000371820 RAB9BQ9NP90 201 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 FBXO7Q9Y3I1 522 aa8.53□□□□□ -1.04
COL5A1-202ENST00000371820 RBM7Q9Y580 266 aaKnown RBP8.53□□□□□ -1.04
COL5A1-202ENST00000371820 C9JQL5 133 aa8.52□□□□□ -1.05
COL5A1-202ENST00000371820 RPP30P78346 268 aaKnown RBP8.52□□□□□ -1.05
COL5A1-202ENST00000371820 CTAG1AP78358 180 aa8.52□□□□□ -1.05
COL5A1-202ENST00000371820 PAX8Q06710 450 aa8.52□□□□□ -1.05
COL5A1-202ENST00000371820 HABP2Q14520 560 aaPredicted RBP8.52□□□□□ -1.05
COL5A1-202ENST00000371820 ZNF146Q15072 292 aa8.52□□□□□ -1.05
COL5A1-202ENST00000371820 CXorf66Q5JRM2 361 aaPredicted RBP8.52□□□□□ -1.05
COL5A1-202ENST00000371820 DNLZQ5SXM8 178 aa8.52□□□□□ -1.05
COL5A1-202ENST00000371820 WDR25Q64LD2 544 aaPredicted RBP8.52□□□□□ -1.05
COL5A1-202ENST00000371820 GPR146Q96CH1 333 aa8.52□□□□□ -1.05
COL5A1-202ENST00000371820 PSENENQ9NZ42 101 aa8.52□□□□□ -1.05
COL5A1-202ENST00000371820 TRAPPC2LQ9UL33 140 aa8.52□□□□□ -1.05
COL5A1-202ENST00000371820 ELOA3CA0A087WX78 387 aaPredicted RBP8.51□□□□□ -1.05
COL5A1-202ENST00000371820 TMEM89A2RUT3 159 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 C3orf80F5H4A9 247 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 H3BQ15 152 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 OR13C7P0DN81 318 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 CFHR2P36980 270 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 GLIPR1P48060 266 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 BPIFB3P59826 476 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 AKIRIN2Q53H80 203 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 TEX36Q5VZQ5 186 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 SLC35E4Q6ICL7 350 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 SPSB3Q6PJ21 355 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 LYPD2Q6UXB3 125 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 ZNF497Q6ZNH5 498 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 CENPVQ7Z7K6 275 aaPredicted RBP8.51□□□□□ -1.05
COL5A1-202ENST00000371820 GCSAMQ8N6F7 178 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 LRRC29Q8WV35 223 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 MBNL3Q9NUK0 354 aaKnown RBP8.51□□□□□ -1.05
COL5A1-202ENST00000371820 VAX2Q9UIW0 290 aa8.51□□□□□ -1.05
COL5A1-202ENST00000371820 PUS1Q9Y606 427 aaKnown RBP eCLIP8.51□□□□□ -1.05
COL5A1-202ENST00000371820 CLDN34H7C241 214 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 GPR37O15354 613 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 LHBP01229 141 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 PAX9P55771 341 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 PAX2Q02962 417 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 LRRC75BQ2VPJ9 315 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 Q6P435 159 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 WDR82Q6UXN9 313 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 HEPN1Q6WQI6 88 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 ZNF66Q6ZN08 573 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 ZNF841Q6ZN19 808 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 ZNF826PQ6ZT77 177 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 THNSL2Q86YJ6 484 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 PPP1R35Q8TAP8 253 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 PLPPR1Q8TBJ4 325 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 DYRK2Q92630 601 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 GALMQ96C23 342 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 BSCL2Q96G97 398 aaPredicted RBP8.5□□□□□ -1.05
COL5A1-202ENST00000371820 SSX3Q99909 188 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 TXNDC17Q9BRA2 123 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 SH3BGRL3Q9H299 93 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 OR51M1Q9H341 326 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.5□□□□□ -1.05
COL5A1-202ENST00000371820 KAAG1Q9UBP8 84 aa8.5□□□□□ -1.05
COL5A1-202ENST00000371820 TRAV24A0A0B4J272 114 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 TRAV40A0A0B4J280 105 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 LOC102723971A0A1B0GUV8 181 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 TMEM30CPA0ZSE6 113 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 NKX6-3A6NJ46 265 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 PCP4L1A6NKN8 68 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 FAM90A9PA6NNJ1 464 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 SRRM5B3KS81 715 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 C17orf112F2Z3M2 114 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 CDIPTO14735 213 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 TMPRSS2O15393 492 aa8.49□□□□□ -1.05
COL5A1-202ENST00000371820 EIF3GO75821 320 aaKnown RBP eCLIP8.49□□□□□ -1.05
COL5A1-202ENST00000371820 GYPAP02724 150 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms