RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 PRR31Q5SQ13 230 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 Q6ZR03 302 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 FAM214BQ7L5A3 538 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 SLC25A45Q8N413 288 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 ZNF738Q8NE65 137 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 OR10P1Q8NGE3 313 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 CSTL1Q9H114 145 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 CST9LQ9H4G1 147 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 CDC42EP3Q9UKI2 254 aa9.69□□□□□ -0.86
SMARCA1-201ENST00000371121 ZZEF1O43149 2961 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 PSG1P11464 419 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 HYAL1Q12794 435 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 TBR1Q16650 682 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 VHLLQ6RSH7 139 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 OR4P4Q8NGL7 312 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 GGTLC1Q9BX51 225 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 SRIP30626 198 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 FXYD3Q14802 87 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 PCOLCEQ15113 449 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 C18orf32Q8TCD1 76 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 ZNF503Q96F45 646 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 RFPL3SP0C7P2 107 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 OCIAD2Q56VL3 154 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 LDLRAD2Q5SZI1 272 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 MCEMP1Q8IX19 187 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 ABHD3Q8WU67 409 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 ZNF586Q9NXT0 402 aa9.68□□□□□ -0.86
SMARCA1-201ENST00000371121 IGHV1OR15-9A0A0B4J2B8 117 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 VWC2LB2RUY7 222 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 NEURL1O76050 574 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 CA1P00915 261 aaPredicted RBP9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 OR9G9P0C7N8 305 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 CA6P23280 308 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 FKBP2P26885 142 aaKnown RBP9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 CD1BP29016 333 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 TNXAQ16473 311 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 MIC13Q5XKP0 118 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 DOLPP1Q86YN1 238 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 TUBG2Q9NRH3 451 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 KCNS2Q9ULS6 477 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 ZNF835Q9Y2P0 537 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 LSM4Q9Y4Z0 139 aaKnown RBP9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 OR2T8A6NH00 312 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 C9JCJ5 164 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 TRAPPC2LH3BP13 241 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 MS4A5Q9H3V2 200 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 RARRES3Q9UL19 164 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 TRAV30A0A087WSZ9 112 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 TRGV10A0A0A0MS01 117 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 TFF1P04155 84 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 OR10J4P0C629 311 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 TNFSF4P23510 183 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 GATA2P23769 480 aaPredicted RBP9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 DSCR4P56555 118 aaPredicted RBP9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 RIPPLY2Q5TAB7 128 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 GCNT2Q8N0V5 402 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 ZNF439Q8NDP4 499 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 OR8B3Q8NGG8 313 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 ST6GALNAC6Q969X2 333 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 OR8B2Q96RD0 313 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 SF3B5Q9BWJ5 86 aaKnown RBP9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 FSCN3Q9NQT6 498 aa9.67□□□□□ -0.86
SMARCA1-201ENST00000371121 OR2H2O95918 312 aa9.66□□□□□ -0.86
SMARCA1-201ENST00000371121 RPEL1Q2QD12 228 aa9.66□□□□□ -0.86
SMARCA1-201ENST00000371121 MPV17L2Q567V2 206 aa9.66□□□□□ -0.86
SMARCA1-201ENST00000371121 C19orf25Q9UFG5 118 aaPredicted RBP9.66□□□□□ -0.86
SMARCA1-201ENST00000371121 PSPNO60542 156 aa9.66□□□□□ -0.86
SMARCA1-201ENST00000371121 SSTR5P35346 364 aa9.66□□□□□ -0.86
SMARCA1-201ENST00000371121 ARL4DP49703 201 aa9.66□□□□□ -0.86
SMARCA1-201ENST00000371121 CEBPDP49716 269 aaPredicted RBP9.66□□□□□ -0.86
SMARCA1-201ENST00000371121 RAC3P60763 192 aa9.66□□□□□ -0.86
SMARCA1-201ENST00000371121 FAM58AQ8N1B3 248 aa9.66□□□□□ -0.86
SMARCA1-201ENST00000371121 ZNF645Q8N7E2 425 aa9.66□□□□□ -0.86
SMARCA1-201ENST00000371121 NAT8BQ9UHF3 227 aa9.66□□□□□ -0.86
SMARCA1-201ENST00000371121 A0A096LPE4 126 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 A0A1W2PPZ6 126 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 SMIM27A0A1W2PRY6 76 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 FAM181BA6NEQ2 426 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 ZNF891A8MT65 544 aaPredicted RBP9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 CGAP01215 116 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 OPRK1P41145 380 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 TCL1AP56279 114 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 ERVK11-1P61568 191 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 PLXDC1Q8IUK5 500 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 SPACA3Q8IXA5 215 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 NUDT10Q8NFP7 164 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 SARAFQ96BY9 339 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 PHF7Q9BWX1 381 aaPredicted RBP9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 DOCK7Q96N67 2140 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 C5orf49A4QMS7 147 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 EFNB3Q15768 340 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 MRPL14Q6P1L8 145 aaKnown RBP9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 LINC00173Q6ZV60 143 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 LINC00596Q86U02 117 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 ZNF808Q8N4W9 903 aaPredicted RBP9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 FAM122AQ96E09 287 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 IGF2BP2-AS1Q96M15 143 aa9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 CDX2Q99626 313 aaPredicted RBP9.65□□□□□ -0.86
SMARCA1-201ENST00000371121 TRBV9A0A0B4J1U6 114 aa9.65□□□□□ -0.87
SMARCA1-201ENST00000371121 CCNOP22674 350 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms