RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 AKAP9Q99996 3911 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 PPIAL4CA0A0B4J2A2 164 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 A0A1W2PPE3 182 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 FAM90A26D6RGX4 464 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 PRSS46E5RG02 174 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 HSPA12AO43301 675 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 PROP1O75360 226 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 IL5P05113 134 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 CTSDP07339 412 aaPredicted RBP2.87□□□□□ -1.95
MCF2-202ENST00000370573 OR8U9P0C7N5 309 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 PPIAL4GP0DN37 164 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 PGAM2P15259 253 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 ZBTB25P24278 435 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 NFYBP25208 207 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 RAG2P55895 527 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 DSCR9P59020 149 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 RAB4BP61018 213 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 GNB2P62879 340 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 LCN2P80188 198 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 DHODHQ02127 395 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 TATDN3Q17R31 274 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 CT45A1Q5HYN5 189 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 HEPN1Q6WQI6 88 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 TMED4Q7Z7H5 227 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 LRRC75A-AS1Q8N1F1 130 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 Q8N7P7 452 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 ZNF439Q8NDP4 499 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 OR52B4Q8NGK2 314 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 OR8U1Q8NH10 309 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 CT45A3Q8NHU0 189 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 LRRC20Q8TCA0 184 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 SECTM1Q8WVN6 248 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 TOMM40LQ969M1 308 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 ZNF714Q96N38 554 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 AGMATQ9BSE5 352 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 SUCNR1Q9BXA5 334 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 ALX4Q9H161 411 aaPredicted RBP2.87□□□□□ -1.95
MCF2-202ENST00000370573 MMP26Q9NRE1 261 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 ZNRD1Q9P1U0 126 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 PSG11Q9UQ72 335 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 ITPR3Q14573 2671 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 TEX15Q9BXT5 2789 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 NOTCH2Q04721 2471 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 C7orf66A4D0T2 115 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 A8MXK9 166 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 HSD17B6O14756 317 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 TIMM23O14925 209 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 YPEL1O60688 119 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 CCNKO75909 580 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 DHFRP00374 187 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 OR4E1P0C645 316 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 IGHV1-8P0DP01 117 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 AKR1C4P17516 323 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 LINC00205P59089 165 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 HERV-K104P61576 105 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 ARF6P62330 175 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 SUPT4H1P63272 117 aaKnown RBP2.87□□□□□ -1.95
MCF2-202ENST00000370573 PPP1R1AQ13522 171 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 EIF4EBP1Q13541 118 aaPredicted RBP2.87□□□□□ -1.95
MCF2-202ENST00000370573 SURF2Q15527 256 aaPredicted RBP2.87□□□□□ -1.95
MCF2-202ENST00000370573 PHLDA2Q53GA4 152 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 ZNF818PQ6ZRF7 136 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.87□□□□□ -1.95
MCF2-202ENST00000370573 TEX45Q8NA69 505 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 OR10A7Q8NGE5 316 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 ABHD14BQ96IU4 210 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 YPEL2Q96QA6 119 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 GAL3ST2Q9H3Q3 398 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 GNG12Q9UBI6 72 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 JPT1Q9UK76 154 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 PRELID3BQ9Y3B1 194 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 FLNBO75369 2602 aaKnown RBP2.87□□□□□ -1.95
MCF2-202ENST00000370573 CELSR1Q9NYQ6 3014 aa2.87□□□□□ -1.95
MCF2-202ENST00000370573 CSMD1Q96PZ7 3565 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 IGHV2-70DA0A0C4DH43 119 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 C9orf170A2RU37 121 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 ZNF98A6NK75 572 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 SCGB2A1O75556 95 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 PGLYRP1O75594 196 aaPredicted RBP2.86□□□□□ -1.95
MCF2-202ENST00000370573 NDUFB4O95168 129 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 LIPFP07098 398 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 SLC25A16P16260 332 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 USF1P22415 310 aaPredicted RBP2.86□□□□□ -1.95
MCF2-202ENST00000370573 GNG10P50151 68 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 ARHGDIBP52566 201 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 ELLP55199 621 aaPredicted RBP2.86□□□□□ -1.95
MCF2-202ENST00000370573 PIGPP57054 158 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 UBE2MP61081 183 aaKnown RBP2.86□□□□□ -1.95
MCF2-202ENST00000370573 SCGB2A2Q13296 93 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 ANKRD55Q3KP44 614 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 Q5PR19 223 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 LY6G6FQ5SQ64 297 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 HCP5Q6MZN7 132 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 ODF3L1Q8IXM7 274 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 DRAM1Q8N682 238 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 ZFAND1Q8TCF1 268 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 RBMXL1Q96E39 390 aaKnown RBP2.86□□□□□ -1.95
MCF2-202ENST00000370573 SCGB3A2Q96PL1 93 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 ZNF251Q9BRH9 671 aa2.86□□□□□ -1.95
MCF2-202ENST00000370573 SIRPDQ9H106 197 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms