RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 C17orf112F2Z3M2 114 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 HMGB3O15347 200 aaKnown RBP6.28□□□□□ -1.4
C11orf54-202ENST00000354421 WISP2O76076 250 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 SYNGR4O95473 234 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 IRF2P14316 349 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 RPL29P47914 159 aaKnown RBP6.28□□□□□ -1.4
C11orf54-202ENST00000354421 LHX2P50458 406 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 MLF1P58340 268 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 MRPS11P82912 194 aaKnown RBP6.28□□□□□ -1.4
C11orf54-202ENST00000354421 TFF3Q07654 80 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 TPTE2P1Q5T6R2 138 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 CYB5R2Q6BCY4 276 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 DHRS13Q6UX07 377 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 ZNF497Q6ZNH5 498 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 Q6ZWC4 215 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 ABCA7Q8IZY2 2146 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 ZNF709Q8N972 641 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 OR10P1Q8NGE3 313 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 RDH5Q92781 318 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 RAB1CQ92928 201 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 APOBEC3DQ96AK3 386 aaPredicted RBP6.28□□□□□ -1.4
C11orf54-202ENST00000354421 WFIKKN1Q96NZ8 548 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 CIB3Q96Q77 187 aaPredicted RBP6.28□□□□□ -1.4
C11orf54-202ENST00000354421 NPCDR1Q9BY65 106 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 PILRBQ9UKJ0 227 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 TP53TG3Q9ULZ0 132 aa6.28□□□□□ -1.4
C11orf54-202ENST00000354421 CHD3Q12873 2000 aaKnown RBP6.27□□□□□ -1.41
C11orf54-202ENST00000354421 IGHV5-10-1A0A0J9YXX1 117 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 MDFIC2A0A1B0GVS7 189 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 LRRC30A6NM36 301 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 G3V3Y1 287 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 RAB29O14966 203 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 KRASP01116 189 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 IL6RP08887 468 aaPredicted RBP6.27□□□□□ -1.41
C11orf54-202ENST00000354421 NPSP0C0P6 89 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 COX6A1P12074 109 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 BRS3P32247 399 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 CDC34P49427 236 aaPredicted RBP6.27□□□□□ -1.41
C11orf54-202ENST00000354421 LINC00310P59036 64 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 GNG3P63215 75 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 KRTAP1-1Q07627 177 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 Q0VG73 95 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 EIF4EBP1Q13541 118 aaPredicted RBP6.27□□□□□ -1.41
C11orf54-202ENST00000354421 TOMM20LQ6UXN7 152 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 PRIMA1Q86XR5 153 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 ARL6IP6Q8N6S5 226 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 SFRP2Q96HF1 295 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 THOC3Q96J01 351 aaKnown RBP6.27□□□□□ -1.41
C11orf54-202ENST00000354421 OR2J1Q9GZK6 312 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 LPAR2Q9HBW0 351 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.27□□□□□ -1.41
C11orf54-202ENST00000354421 KCNS2Q9ULS6 477 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 WIPI2Q9Y4P8 454 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 MPC1Q9Y5U8 109 aa6.27□□□□□ -1.41
C11orf54-202ENST00000354421 IGKV3D-15A0A087WSY6 115 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 A0A1B0GUS0 222 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 ZNF503-AS2A6NEH8 195 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 J3QT63 122 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 MMP23AO75900 390 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 UMODP07911 640 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 ZNF16P17020 682 aaPredicted RBP6.26□□□□□ -1.41
C11orf54-202ENST00000354421 CD82P27701 267 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 WNT5AP41221 380 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 ARF1P84077 181 aaKnown RBP6.26□□□□□ -1.41
C11orf54-202ENST00000354421 RPL19P84098 196 aaKnown RBP6.26□□□□□ -1.41
C11orf54-202ENST00000354421 PMP22Q01453 160 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 TMEM183BQ1AE95 376 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 CST9LP1Q5W188 147 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 TIPARPQ7Z3E1 657 aaKnown RBP6.26□□□□□ -1.41
C11orf54-202ENST00000354421 YRDCQ86U90 279 aaKnown RBP6.26□□□□□ -1.41
C11orf54-202ENST00000354421 RPS19BP1Q86WX3 136 aaKnown RBP6.26□□□□□ -1.41
C11orf54-202ENST00000354421 TCTEX1D1Q8N7M0 179 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 Q8N7P7 452 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 ZNF114Q8NC26 417 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 OR5T1Q8NG75 326 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 OR10G8Q8NGN5 311 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 OR10D3Q8NH80 312 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 IL1F10Q8WWZ1 152 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 SDSLQ96GA7 329 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 SGCZQ96LD1 299 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 CCDC74BQ96LY2 380 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 ZNF488Q96MN9 340 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 FANCD2OSQ96PS1 177 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 ZNF552Q9H707 407 aaPredicted RBP6.26□□□□□ -1.41
C11orf54-202ENST00000354421 ZDHHC11Q9H8X9 412 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 PLA2G3Q9NZ20 509 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 CLN8Q9UBY8 286 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 WDR83OSQ9Y284 106 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 RBM7Q9Y580 266 aaKnown RBP6.26□□□□□ -1.41
C11orf54-202ENST00000354421 EML6Q6ZMW3 1958 aa6.26□□□□□ -1.41
C11orf54-202ENST00000354421 BIRC6Q9NR09 4857 aa6.25□□□□□ -1.41
C11orf54-202ENST00000354421 A0A1W2PQM1 296 aa6.25□□□□□ -1.41
C11orf54-202ENST00000354421 ODAMA1E959 279 aa6.25□□□□□ -1.41
C11orf54-202ENST00000354421 A6NNC1 897 aa6.25□□□□□ -1.41
C11orf54-202ENST00000354421 ANKRD30BLA7E2S9 258 aa6.25□□□□□ -1.41
C11orf54-202ENST00000354421 NDUFB4O95168 129 aa6.25□□□□□ -1.41
C11orf54-202ENST00000354421 SELEP16581 610 aa6.25□□□□□ -1.41
C11orf54-202ENST00000354421 KITLGP21583 273 aa6.25□□□□□ -1.41
C11orf54-202ENST00000354421 ATP5G3P48201 142 aa6.25□□□□□ -1.41
C11orf54-202ENST00000354421 COX19Q49B96 90 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms