RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 TRAV1-1A0A0B4J248 108 aa15.26■□□□□ 0.03
HOXA9-201ENST00000343483 CEBPGP53567 150 aa15.26■□□□□ 0.03
HOXA9-201ENST00000343483 PRELID1Q9Y255 219 aa15.26■□□□□ 0.03
HOXA9-201ENST00000343483 NQO2P16083 231 aa15.25■□□□□ 0.03
HOXA9-201ENST00000343483 LOXP28300 417 aaPredicted RBP15.25■□□□□ 0.03
HOXA9-201ENST00000343483 THBS3P49746 956 aa15.25■□□□□ 0.03
HOXA9-201ENST00000343483 SERF2P84101 59 aa15.25■□□□□ 0.03
HOXA9-201ENST00000343483 HEPN1Q6WQI6 88 aa15.25■□□□□ 0.03
HOXA9-201ENST00000343483 ZNF383Q8NA42 475 aa15.25■□□□□ 0.03
HOXA9-201ENST00000343483 IFNA17P01571 189 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 HSPB1P04792 205 aaKnown RBP15.24■□□□□ 0.03
HOXA9-201ENST00000343483 GNLYP22749 145 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 RAB13P51153 203 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 OR10A7Q8NGE5 316 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 OR4A16Q8NH70 328 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 TAF15Q92804 592 aaKnown RBP eCLIP15.24■□□□□ 0.03
HOXA9-201ENST00000343483 TMEM204Q9BSN7 226 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 TUBA4BQ9H853 241 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 KAAG1Q9UBP8 84 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 ARFGEF3Q5TH69 2177 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 NDUFA2O43678 99 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 FBP1P09467 338 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 COL8A2P25067 703 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 ZNF787Q6DD87 383 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 LCN15Q6UWW0 184 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 HIST1H2BAQ96A08 127 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 ISOC2Q96AB3 205 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 ADTRPQ96IZ2 230 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 CIB3Q96Q77 187 aaPredicted RBP15.24■□□□□ 0.03
HOXA9-201ENST00000343483 TMEM140Q9NV12 185 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 GNG13Q9P2W3 67 aa15.24■□□□□ 0.03
HOXA9-201ENST00000343483 HIVEP3Q5T1R4 2406 aa15.23■□□□□ 0.03
HOXA9-201ENST00000343483 ELLP55199 621 aaPredicted RBP15.23■□□□□ 0.03
HOXA9-201ENST00000343483 ZNF726P1Q15940 193 aa15.23■□□□□ 0.03
HOXA9-201ENST00000343483 KHDC3LQ587J8 217 aa15.23■□□□□ 0.03
HOXA9-201ENST00000343483 TMEM41BQ5BJD5 291 aa15.23■□□□□ 0.03
HOXA9-201ENST00000343483 CYB561D1Q8N8Q1 229 aa15.23■□□□□ 0.03
HOXA9-201ENST00000343483 LOC102723971A0A1B0GUV8 181 aa15.23■□□□□ 0.03
HOXA9-201ENST00000343483 FAM90A9PA6NNJ1 464 aa15.23■□□□□ 0.03
HOXA9-201ENST00000343483 FOLR2P14207 255 aa15.23■□□□□ 0.03
HOXA9-201ENST00000343483 ATP6V1FQ16864 119 aa15.23■□□□□ 0.03
HOXA9-201ENST00000343483 ZFP82Q8N141 532 aa15.23■□□□□ 0.03
HOXA9-201ENST00000343483 MBD3L1Q8WWY6 194 aa15.23■□□□□ 0.03
HOXA9-201ENST00000343483 PINX1Q96BK5 328 aaKnown RBP15.23■□□□□ 0.03
HOXA9-201ENST00000343483 A0A1W2PPH5 198 aa15.22■□□□□ 0.03
HOXA9-201ENST00000343483 H3BQ15 152 aa15.22■□□□□ 0.03
HOXA9-201ENST00000343483 PPOXP50336 477 aa15.22■□□□□ 0.03
HOXA9-201ENST00000343483 RPS16P62249 146 aaKnown RBP15.22■□□□□ 0.03
HOXA9-201ENST00000343483 SSX7Q7RTT5 188 aa15.22■□□□□ 0.03
HOXA9-201ENST00000343483 RCC1LQ96I51 464 aaKnown RBP15.22■□□□□ 0.03
HOXA9-201ENST00000343483 TMEM147Q9BVK8 224 aa15.22■□□□□ 0.03
HOXA9-201ENST00000343483 TRAV3A0A0B4J244 114 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 A0A1W2PPE2 198 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 MT-ND4LP03901 98 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 FGF8P55075 233 aaPredicted RBP15.21■□□□□ 0.03
HOXA9-201ENST00000343483 OR10P1Q8NGE3 313 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 C2CD4CQ8TF44 421 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 RHOVQ96L33 236 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 TIMM9Q9Y5J7 89 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 UTP20O75691 2785 aaKnown RBP15.21■□□□□ 0.03
HOXA9-201ENST00000343483 ZFP92A6NM28 416 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 PMS2P5A8MQ11 134 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 J3QKU1 62 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 ARG1P05089 322 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 CT45A6P0DMU7 189 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 CT45A5P0DMU8 189 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 CT45A7P0DMV0 189 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 RELBQ01201 579 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 HNF4GQ14541 408 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 ZNF429Q86V71 674 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 BIN3Q9NQY0 253 aa15.21■□□□□ 0.03
HOXA9-201ENST00000343483 AARDQ4LEZ3 155 aa15.2■□□□□ 0.02
HOXA9-201ENST00000343483 RAB39BQ96DA2 213 aa15.2■□□□□ 0.02
HOXA9-201ENST00000343483 YLPM1P49750 1951 aaKnown RBP15.2■□□□□ 0.02
HOXA9-201ENST00000343483 LRBAP50851 2863 aa15.2■□□□□ 0.02
HOXA9-201ENST00000343483 LY6HO94772 140 aa15.2■□□□□ 0.02
HOXA9-201ENST00000343483 BCL2P10415 239 aa15.2■□□□□ 0.02
HOXA9-201ENST00000343483 SPCS3P61009 180 aa15.2■□□□□ 0.02
HOXA9-201ENST00000343483 RAB5BP61020 215 aa15.2■□□□□ 0.02
HOXA9-201ENST00000343483 OR4A47Q6IF82 309 aa15.2■□□□□ 0.02
HOXA9-201ENST00000343483 USP9XQ93008 2570 aaPredicted RBP15.19■□□□□ 0.02
HOXA9-201ENST00000343483 MAP1LC3B2A6NCE7 125 aa15.19■□□□□ 0.02
HOXA9-201ENST00000343483 IGKV1-16P04430 117 aa15.19■□□□□ 0.02
HOXA9-201ENST00000343483 FGF7P21781 194 aa15.19■□□□□ 0.02
HOXA9-201ENST00000343483 HABP2Q14520 560 aaPredicted RBP15.19■□□□□ 0.02
HOXA9-201ENST00000343483 RTL8BQ17RB0 113 aa15.19■□□□□ 0.02
HOXA9-201ENST00000343483 RNF212Q495C1 297 aa15.19■□□□□ 0.02
HOXA9-201ENST00000343483 TMEM155Q4W5P6 130 aa15.19■□□□□ 0.02
HOXA9-201ENST00000343483 OR10X1Q8NGY0 326 aa15.19■□□□□ 0.02
HOXA9-201ENST00000343483 MAP1LC3BQ9GZQ8 125 aa15.19■□□□□ 0.02
HOXA9-201ENST00000343483 RAB1BQ9H0U4 201 aa15.19■□□□□ 0.02
HOXA9-201ENST00000343483 SLC35D1Q9NTN3 355 aa15.19■□□□□ 0.02
HOXA9-201ENST00000343483 C1orf196B1AJZ1 125 aa15.18■□□□□ 0.02
HOXA9-201ENST00000343483 ZNF833PQ6ZTB9 187 aa15.18■□□□□ 0.02
HOXA9-201ENST00000343483 CENPVQ7Z7K6 275 aaPredicted RBP15.18■□□□□ 0.02
HOXA9-201ENST00000343483 FAM24BQ8N5W8 94 aa15.18■□□□□ 0.02
HOXA9-201ENST00000343483 OR10G4Q8NGN3 311 aa15.18■□□□□ 0.02
HOXA9-201ENST00000343483 NIPSNAP3BQ9BS92 247 aa15.18■□□□□ 0.02
HOXA9-201ENST00000343483 MRPL20Q9BYC9 149 aaKnown RBP15.18■□□□□ 0.02
HOXA9-201ENST00000343483 CBLN4Q9NTU7 201 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms