RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 TP53RKQ96S44 253 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 HSPB9Q9BQS6 159 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 ZNF747Q9BV97 191 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 WNT10AQ9GZT5 417 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 PARP11Q9NR21 331 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 BET1LQ9NYM9 111 aa9.41□□□□□ -0.9
SPTLC1-202ENST00000337841 UPK2O00526 184 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 KBTBD11O94819 623 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 IGF1P05019 195 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 OR5AC1P0C628 307 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 VDAC1P21796 283 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 UCP1P25874 307 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 G6PCP35575 357 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 UBE2MP61081 183 aaKnown RBP9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 PJVKQ0ZLH3 352 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 TNXAQ16473 311 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 TMEM95Q3KNT9 176 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 OR4A47Q6IF82 309 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 H2BFWTQ7Z2G1 175 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 SLC25A42Q86VD7 318 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 ZNF695Q8IW36 515 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 STPG2Q8N412 459 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 OR5AU1Q8NGC0 362 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 SPATA3Q8NHX4 192 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 GLYATL2Q8WU03 294 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 RRNAD1Q96FB5 475 aaKnown RBP9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 GALNT14Q96FL9 552 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 TMEM222Q9H0R3 208 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 ZNF430Q9H8G1 570 aaPredicted RBP9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 TPSG1Q9NRR2 321 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 TMEM140Q9NV12 185 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 LINC00527Q9UJ94 153 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 ZNF580Q9UK33 172 aa9.4□□□□□ -0.9
SPTLC1-202ENST00000337841 TRAV41A0A0B4J266 112 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 PSMB11A5LHX3 300 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 MARCH11A6NNE9 402 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 CDS2O95674 445 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 TCRBP04435 133 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 IL6RP08887 468 aaPredicted RBP9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 SLC6A1P30531 599 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 BTCP35070 178 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 RPL8P62917 257 aaKnown RBP9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 SRPXP78539 464 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 SHISA2Q6UWI4 295 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 COMMD1Q8N668 190 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 ARPC1AQ92747 370 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 TMEM230Q96A57 120 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 TMEM68Q96MH6 324 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 NOL4LQ96MY1 436 aaPredicted RBP9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 FKBP11Q9NYL4 201 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 TBC1D24Q9ULP9 559 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 NUBP2Q9Y5Y2 271 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 WSB1Q9Y6I7 421 aa9.39□□□□□ -0.91
SPTLC1-202ENST00000337841 MSGN1A6NI15 193 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 ARPC1BO15143 372 aaKnown RBP9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 ATP6V0E1O15342 81 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 FGF2P09038 288 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 HLA-GP17693 338 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 VAMP1P23763 118 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 AKR1C2P52895 323 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 RAB25P57735 213 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 IFITM3Q01628 133 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 TMEM187Q14656 261 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 AKIRIN2Q53H80 203 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 UNQ5815/PRO19632Q6UWF5 114 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 LGI3Q8N145 548 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 OR4X2Q8NGF9 303 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 OR4A16Q8NH70 328 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 SGMS2Q8NHU3 365 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 RNASE11Q8TAA1 199 aaKnown RBP9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 GRPEL2Q8TAA5 225 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 ENKURQ8TC29 256 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 WFDC12Q8WWY7 111 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 RBPMSQ93062 196 aaKnown RBP9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 IL22RA2Q969J5 263 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 SEC22AQ96IW7 307 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 TMEM56Q96MV1 263 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 PHB2Q99623 299 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 SPIN2AQ99865 258 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 SPIN2BQ9BPZ2 258 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 COMMD5Q9GZQ3 224 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 ALX4Q9H161 411 aaPredicted RBP9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 PRNDQ9UKY0 176 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 FLVCR2Q9UPI3 526 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 TMEM56-RWDD3S4R434 201 aa9.38□□□□□ -0.91
SPTLC1-202ENST00000337841 SFT2D2O95562 160 aa9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 IGKV1-39P01597 117 aa9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 IGKV1D-39P04432 117 aa9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 H2AFB2P0C5Z0 115 aa9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 EGR2P11161 476 aaPredicted RBP9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 RPL27AP46776 148 aaKnown RBP9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 SUPT4H1P63272 117 aaKnown RBP9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 MRGPRG-AS1Q2M3A8 158 aa9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 C4orf46Q504U0 113 aa9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 TMEM268Q5VZI3 342 aa9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 TEX38Q6PEX7 206 aa9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 ZNF329Q86UD4 541 aa9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 FAM219AQ8IW50 185 aa9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 SELENOHQ8IZQ5 122 aaKnown RBP9.37□□□□□ -0.91
SPTLC1-202ENST00000337841 LFNGQ8NES3 379 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms