RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 CD46P15529 392 aa15.82■□□□□ 0.12
RTN4-201ENST00000317610 CD177Q8N6Q3 437 aa15.82■□□□□ 0.12
RTN4-201ENST00000317610 DCTN5Q9BTE1 182 aa15.82■□□□□ 0.12
RTN4-201ENST00000317610 TMEM106BQ9NUM4 274 aa15.82■□□□□ 0.12
RTN4-201ENST00000317610 LY96Q9Y6Y9 160 aa15.82■□□□□ 0.12
RTN4-201ENST00000317610 AQP7O14520 342 aa15.81■□□□□ 0.12
RTN4-201ENST00000317610 GCHFRP30047 84 aa15.81■□□□□ 0.12
RTN4-201ENST00000317610 LINC00310P59036 64 aa15.81■□□□□ 0.12
RTN4-201ENST00000317610 MRPL52Q86TS9 123 aaKnown RBP15.81■□□□□ 0.12
RTN4-201ENST00000317610 SDSLQ96GA7 329 aa15.81■□□□□ 0.12
RTN4-201ENST00000317610 JPT1Q9UK76 154 aa15.81■□□□□ 0.12
RTN4-201ENST00000317610 FAM186AA6NE01 2351 aa15.81■□□□□ 0.12
RTN4-201ENST00000317610 TET2Q6N021 2002 aaPredicted RBP15.81■□□□□ 0.12
RTN4-201ENST00000317610 VPS13AQ96RL7 3174 aa15.81■□□□□ 0.12
RTN4-201ENST00000317610 TRGV8A0A0C4DH27 118 aa15.8■□□□□ 0.12
RTN4-201ENST00000317610 C9JCJ5 164 aa15.8■□□□□ 0.12
RTN4-201ENST00000317610 IGKV3-15P01624 115 aa15.8■□□□□ 0.12
RTN4-201ENST00000317610 ZNF883P0CG24 379 aa15.8■□□□□ 0.12
RTN4-201ENST00000317610 TDGF1P3P51864 188 aa15.8■□□□□ 0.12
RTN4-201ENST00000317610 MORN2Q502X0 79 aa15.8■□□□□ 0.12
RTN4-201ENST00000317610 TBX15Q96SF7 602 aa15.8■□□□□ 0.12
RTN4-201ENST00000317610 AHCTF1Q8WYP5 2266 aa15.8■□□□□ 0.12
RTN4-201ENST00000317610 K7EN84 100 aa15.8■□□□□ 0.12
RTN4-201ENST00000317610 TPPP2P59282 170 aa15.8■□□□□ 0.12
RTN4-201ENST00000317610 GRIFINA4D1Z8 144 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 IL6RP08887 468 aaPredicted RBP15.79■□□□□ 0.12
RTN4-201ENST00000317610 ERVK-16P61578 105 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 ZNF90Q03938 601 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 CR1LQ2VPA4 569 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 TEX43Q6ZNM6 134 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 Q6ZT83 130 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 Q6ZWC4 215 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 ATG101Q9BSB4 218 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 NPVFQ9HCQ7 196 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 TUBG2Q9NRH3 451 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 M0R1X1 148 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 TMEM164Q5U3C3 297 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 ABHD12Q8N2K0 398 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 C20orf144Q9BQM9 153 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 CLCF1Q9UBD9 225 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 IL17BQ9UHF5 180 aa15.79■□□□□ 0.12
RTN4-201ENST00000317610 TRGV10A0A0A0MS01 117 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 A0A1B0GWJ7 208 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 ZNF705FA8MVS1 300 aaPredicted RBP15.78■□□□□ 0.12
RTN4-201ENST00000317610 TIMM8AO60220 97 aaPredicted RBP15.78■□□□□ 0.12
RTN4-201ENST00000317610 ZNF705DP0CH99 300 aaPredicted RBP15.78■□□□□ 0.12
RTN4-201ENST00000317610 ZNF705BP0CI00 300 aaPredicted RBP15.78■□□□□ 0.12
RTN4-201ENST00000317610 CBLN1P23435 193 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 THBS3P49746 956 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 LGALS4P56470 323 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 RPL31P62899 125 aaKnown RBP15.78■□□□□ 0.12
RTN4-201ENST00000317610 EFNB3Q15768 340 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 HLA-DRB5Q30154 266 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 CDX2Q99626 313 aaPredicted RBP15.78■□□□□ 0.12
RTN4-201ENST00000317610 MRPL18Q9H0U6 180 aaKnown RBP15.78■□□□□ 0.12
RTN4-201ENST00000317610 TCF19Q9Y242 345 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 TRAV3A0A0B4J244 114 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 PRDX2P32119 198 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 RHOBP62745 196 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 GUSBP1Q15486 140 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 LTC4SQ16873 150 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 TPTE2P1Q5T6R2 138 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 VKORC1L1Q8N0U8 176 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 FER1L6-AS2Q96M78 137 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 TMEM140Q9NV12 185 aa15.78■□□□□ 0.12
RTN4-201ENST00000317610 AREGP15514 252 aa15.77■□□□□ 0.12
RTN4-201ENST00000317610 HNF1AP20823 631 aa15.77■□□□□ 0.12
RTN4-201ENST00000317610 KIR2DS2P43631 304 aa15.77■□□□□ 0.12
RTN4-201ENST00000317610 EDDM3AQ14507 147 aa15.77■□□□□ 0.12
RTN4-201ENST00000317610 ARSJQ5FYB0 599 aaPredicted RBP15.77■□□□□ 0.12
RTN4-201ENST00000317610 TMPRSS7Q7RTY8 843 aa15.77■□□□□ 0.12
RTN4-201ENST00000317610 DDB2Q92466 427 aa15.77■□□□□ 0.12
RTN4-201ENST00000317610 OPN3Q9H1Y3 402 aaPredicted RBP15.77■□□□□ 0.12
RTN4-201ENST00000317610 IFI27L2Q9H2X8 130 aa15.77■□□□□ 0.12
RTN4-201ENST00000317610 PRO3102Q9H379 93 aa15.77■□□□□ 0.12
RTN4-201ENST00000317610 GNG12Q9UBI6 72 aa15.77■□□□□ 0.12
RTN4-201ENST00000317610 M0QZK8 103 aa15.77■□□□□ 0.11
RTN4-201ENST00000317610 TNFSF13O75888 250 aa15.77■□□□□ 0.11
RTN4-201ENST00000317610 MT-CO2P00403 227 aa15.77■□□□□ 0.11
RTN4-201ENST00000317610 CRISP2P16562 243 aa15.77■□□□□ 0.11
RTN4-201ENST00000317610 RANP62826 216 aaKnown RBP15.77■□□□□ 0.11
RTN4-201ENST00000317610 ARG2P78540 354 aa15.77■□□□□ 0.11
RTN4-201ENST00000317610 Q0VG73 95 aa15.77■□□□□ 0.11
RTN4-201ENST00000317610 STPG3Q8N7X2 389 aa15.77■□□□□ 0.11
RTN4-201ENST00000317610 LRRC29Q8WV35 223 aa15.77■□□□□ 0.11
RTN4-201ENST00000317610 SSMEM1Q8WWF3 244 aa15.77■□□□□ 0.11
RTN4-201ENST00000317610 SEPSECSQ9HD40 501 aaKnown RBP15.77■□□□□ 0.11
RTN4-201ENST00000317610 DMDP11532 3685 aa15.76■□□□□ 0.11
RTN4-201ENST00000317610 F2RL2O00254 374 aa15.76■□□□□ 0.11
RTN4-201ENST00000317610 RPL29P47914 159 aaKnown RBP15.76■□□□□ 0.11
RTN4-201ENST00000317610 LOXL3P58215 753 aa15.76■□□□□ 0.11
RTN4-201ENST00000317610 RPL39P5Q59GN2 51 aa15.76■□□□□ 0.11
RTN4-201ENST00000317610 SPATA31B1PQ5VZV4 182 aa15.76■□□□□ 0.11
RTN4-201ENST00000317610 TEPPQ6URK8 271 aa15.76■□□□□ 0.11
RTN4-201ENST00000317610 FAM214BQ7L5A3 538 aa15.76■□□□□ 0.11
RTN4-201ENST00000317610 GCNT2Q8N0V5 402 aa15.76■□□□□ 0.11
RTN4-201ENST00000317610 EAF1Q96JC9 268 aaPredicted RBP15.76■□□□□ 0.11
RTN4-201ENST00000317610 S1PR3Q99500 378 aa15.76■□□□□ 0.11
RTN4-201ENST00000317610 MSL2Q9HCI7 577 aa15.76■□□□□ 0.11
RTN4-201ENST00000317610 ARL2-SNX15V9GYD0 113 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms