RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 RPL8P62917 257 aaKnown RBP14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 Q6ZS46 218 aa14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 SLC25A42Q86VD7 318 aa14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 FAM219AQ8IW50 185 aa14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 STPG2Q8N412 459 aa14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 C3orf56Q8N813 242 aa14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 WFDC12Q8WWY7 111 aa14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 TP53RKQ96S44 253 aa14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 HSPB9Q9BQS6 159 aa14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 TMEM140Q9NV12 185 aa14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 FKBP11Q9NYL4 201 aa14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 CACFD1Q9UGQ2 172 aa14.14□□□□□ -0.15
SSSCA1-201ENST00000309328 SNAPC5O75971 98 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 CDS2O95674 445 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 KRASP01116 189 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 FXYD3Q14802 87 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 THOC7Q6I9Y2 204 aaKnown RBP14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 H2BFWTQ7Z2G1 175 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 CENPVQ7Z7K6 275 aaPredicted RBP14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 KLHDC1Q8N7A1 406 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 SGMS2Q8NHU3 365 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 ENKURQ8TC29 256 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 GLYATL2Q8WU03 294 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 RBPMSQ93062 196 aaKnown RBP14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 TMEM230Q96A57 120 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 RRNAD1Q96FB5 475 aaKnown RBP14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 TMEM56Q96MV1 263 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 MDFIQ99750 246 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 SPIN2AQ99865 258 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 SPIN2BQ9BPZ2 258 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 ZNF747Q9BV97 191 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 ALX4Q9H161 411 aaPredicted RBP14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 ZNF430Q9H8G1 570 aaPredicted RBP14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 PARP11Q9NR21 331 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 TBC1D24Q9ULP9 559 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 TMEM56-RWDD3S4R434 201 aa14.13□□□□□ -0.15
SSSCA1-201ENST00000309328 DUXBA0A1W2PPF3 345 aa14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 PSMB11A5LHX3 300 aa14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 SH2D7A6NKC9 451 aaPredicted RBP14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 FCN1O00602 326 aa14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 IL6RP08887 468 aaPredicted RBP14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 AKR1C2P52895 323 aa14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 AKIRIN2Q53H80 203 aa14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 SHISA2Q6UWI4 295 aa14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 SSX9Q7RTT3 188 aa14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 ZNF695Q8IW36 515 aa14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 VKORC1L1Q8N0U8 176 aa14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 ADAD2Q8NCV1 583 aaKnown RBP14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 OR4X2Q8NGF9 303 aa14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 SEC22AQ96IW7 307 aa14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 CLCC1Q96S66 551 aa14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 C20orf85Q9H1P6 137 aa14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 TPSG1Q9NRR2 321 aa14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 PRNDQ9UKY0 176 aa14.12□□□□□ -0.15
SSSCA1-201ENST00000309328 HAX1O00165 279 aa14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 UPK2O00526 184 aa14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 ATP6V0E1O15342 81 aa14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 TCRBP04435 133 aa14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 HLA-GP17693 338 aa14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 G6PCP35575 357 aa14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 RAB25P57735 213 aa14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 GNB1P62873 340 aa14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 TNXAQ16473 311 aa14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 TMEM95Q3KNT9 176 aa14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 TEX38Q6PEX7 206 aa14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 LGI3Q8N145 548 aa14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 WIPF2Q8TF74 440 aaPredicted RBP14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 ABHD5Q8WTS1 349 aa14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 TAF15Q92804 592 aaKnown RBP eCLIP14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 RBMXL1Q96E39 390 aaKnown RBP14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 SRSF8Q9BRL6 282 aaKnown RBP14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 COMMD5Q9GZQ3 224 aa14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 NUBP2Q9Y5Y2 271 aa14.11□□□□□ -0.15
SSSCA1-201ENST00000309328 TRAV41A0A0B4J266 112 aa14.1□□□□□ -0.15
SSSCA1-201ENST00000309328 VAMP1P23763 118 aa14.1□□□□□ -0.15
SSSCA1-201ENST00000309328 TMEM187Q14656 261 aa14.1□□□□□ -0.15
SSSCA1-201ENST00000309328 SP6Q3SY56 376 aa14.1□□□□□ -0.15
SSSCA1-201ENST00000309328 HSD17B13Q7Z5P4 300 aaPredicted RBP14.1□□□□□ -0.15
SSSCA1-201ENST00000309328 MRPL41Q8IXM3 137 aaKnown RBP14.1□□□□□ -0.15
SSSCA1-201ENST00000309328 OR5B3Q8NH48 314 aa14.1□□□□□ -0.15
SSSCA1-201ENST00000309328 RNASE11Q8TAA1 199 aaKnown RBP14.1□□□□□ -0.15
SSSCA1-201ENST00000309328 SRSF12Q8WXF0 261 aaKnown RBP14.1□□□□□ -0.15
SSSCA1-201ENST00000309328 A0A0B4J2A0 478 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 ARPC1BO15143 372 aaKnown RBP14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 FBXO24O75426 580 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 SFT2D2O95562 160 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 IGKV1-39P01597 117 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 IGKV1D-39P04432 117 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 ELANEP08246 267 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 RPL27AP46776 148 aaKnown RBP14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 SUPT4H1P63272 117 aaKnown RBP14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 NDPQ00604 133 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 PJVKQ0ZLH3 352 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 LRTM2Q8N967 370 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 DUSP18Q8NEJ0 188 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 OR5AU1Q8NGC0 362 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 OR5M8Q8NGP6 311 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 OR4A16Q8NH70 328 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 GRPEL2Q8TAA5 225 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 LSM10Q969L4 123 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms