RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 PAGE4O60829 102 aa15.33■□□□□ 0.04
RNF139-201ENST00000303545 IFNA1P01562 189 aa15.33■□□□□ 0.04
RNF139-201ENST00000303545 IFNA4P05014 189 aa15.33■□□□□ 0.04
RNF139-201ENST00000303545 UBE2G2P60604 165 aa15.33■□□□□ 0.04
RNF139-201ENST00000303545 MEF2BQ02080 365 aaPredicted RBP15.33■□□□□ 0.04
RNF139-201ENST00000303545 ADIRFQ15847 76 aa15.33■□□□□ 0.04
RNF139-201ENST00000303545 NCMAPQ5T1S8 102 aa15.33■□□□□ 0.04
RNF139-201ENST00000303545 NEUROG1Q92886 237 aa15.33■□□□□ 0.04
RNF139-201ENST00000303545 SMIM7Q9BQ49 75 aa15.33■□□□□ 0.04
RNF139-201ENST00000303545 ZNF251Q9BRH9 671 aa15.33■□□□□ 0.04
RNF139-201ENST00000303545 TCF19Q9Y242 345 aa15.33■□□□□ 0.04
RNF139-201ENST00000303545 SOX15O60248 233 aa15.32■□□□□ 0.04
RNF139-201ENST00000303545 MDKP21741 143 aaPredicted RBP15.32■□□□□ 0.04
RNF139-201ENST00000303545 C3orf36Q3SXR2 165 aa15.32■□□□□ 0.04
RNF139-201ENST00000303545 OR4A47Q6IF82 309 aa15.32■□□□□ 0.04
RNF139-201ENST00000303545 ZNF788Q6ZQV5 615 aa15.32■□□□□ 0.04
RNF139-201ENST00000303545 Q8N7P7 452 aa15.32■□□□□ 0.04
RNF139-201ENST00000303545 OR5T1Q8NG75 326 aa15.32■□□□□ 0.04
RNF139-201ENST00000303545 ACTR3CQ9C0K3 210 aaPredicted RBP15.32■□□□□ 0.04
RNF139-201ENST00000303545 ZZEF1O43149 2961 aa15.32■□□□□ 0.04
RNF139-201ENST00000303545 VDAC2P45880 294 aaPredicted RBP15.32■□□□□ 0.04
RNF139-201ENST00000303545 WDR25Q64LD2 544 aaPredicted RBP15.32■□□□□ 0.04
RNF139-201ENST00000303545 SLC16A13Q7RTY0 426 aa15.32■□□□□ 0.04
RNF139-201ENST00000303545 SPACA3Q8IXA5 215 aa15.32■□□□□ 0.04
RNF139-201ENST00000303545 OR4S2Q8NH73 311 aa15.32■□□□□ 0.04
RNF139-201ENST00000303545 MS4A5Q9H3V2 200 aa15.32■□□□□ 0.04
RNF139-201ENST00000303545 SDF2L1Q9HCN8 221 aa15.32■□□□□ 0.04
RNF139-201ENST00000303545 IDI2-AS1Q9NZ38 188 aa15.32■□□□□ 0.04
RNF139-201ENST00000303545 GFRA3O60609 400 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 IGKV1-16P04430 117 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 CCL3L1P16619 93 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 PSMB3P49720 205 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 KIAA0141Q14154 515 aaPredicted RBP15.31■□□□□ 0.04
RNF139-201ENST00000303545 VWC2Q2TAL6 325 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 LURAP1LQ8IV03 231 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 NECAP1Q8NC96 275 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 SSMEM1Q8WWF3 244 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 CCL17Q92583 94 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 FAM122AQ96E09 287 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 A0A087WWC5 75 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 RAB7AP51149 207 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 MIC13Q5XKP0 118 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 ZCCHC14Q8WYQ9 949 aaKnown RBP15.31■□□□□ 0.04
RNF139-201ENST00000303545 TMEM204Q9BSN7 226 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 LRFN3Q9BTN0 628 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 DCHS2Q6V1P9 2916 aa15.31■□□□□ 0.04
RNF139-201ENST00000303545 CDC34P49427 236 aaPredicted RBP15.3■□□□□ 0.04
RNF139-201ENST00000303545 CLEC12BQ2HXU8 276 aa15.3■□□□□ 0.04
RNF139-201ENST00000303545 TREML4Q6UXN2 200 aa15.3■□□□□ 0.04
RNF139-201ENST00000303545 SCNM1Q9BWG6 230 aa15.3■□□□□ 0.04
RNF139-201ENST00000303545 C17orf112F2Z3M2 114 aa15.3■□□□□ 0.04
RNF139-201ENST00000303545 FCN3O75636 299 aa15.3■□□□□ 0.04
RNF139-201ENST00000303545 FAM87AP0C7U9 286 aa15.3■□□□□ 0.04
RNF139-201ENST00000303545 REG1BP48304 166 aa15.3■□□□□ 0.04
RNF139-201ENST00000303545 WDR83OSQ9Y284 106 aa15.3■□□□□ 0.04
RNF139-201ENST00000303545 C17orf100A8MU93 164 aa15.3■□□□□ 0.04
RNF139-201ENST00000303545 LINC00587B1AMM8 73 aa15.3■□□□□ 0.04
RNF139-201ENST00000303545 MBP02144 154 aa15.3■□□□□ 0.04
RNF139-201ENST00000303545 ZNF439Q8NDP4 499 aa15.3■□□□□ 0.04
RNF139-201ENST00000303545 NUP37Q8NFH4 326 aa15.3■□□□□ 0.04
RNF139-201ENST00000303545 H1FXQ92522 213 aaKnown RBP15.3■□□□□ 0.04
RNF139-201ENST00000303545 P2RX4Q99571 388 aa15.3■□□□□ 0.04
RNF139-201ENST00000303545 MGST2Q99735 147 aa15.3■□□□□ 0.04
RNF139-201ENST00000303545 AURKAIP1Q9NWT8 199 aaPredicted RBP15.3■□□□□ 0.04
RNF139-201ENST00000303545 PTPRQQ9UMZ3 2332 aa15.29■□□□□ 0.04
RNF139-201ENST00000303545 UBE2CO00762 179 aa15.29■□□□□ 0.04
RNF139-201ENST00000303545 RBFOX2O43251 390 aaKnown RBP eCLIP15.29■□□□□ 0.04
RNF139-201ENST00000303545 YIF1AO95070 293 aa15.29■□□□□ 0.04
RNF139-201ENST00000303545 TBR1Q16650 682 aa15.29■□□□□ 0.04
RNF139-201ENST00000303545 MALSU1Q96EH3 234 aa15.29■□□□□ 0.04
RNF139-201ENST00000303545 WFIKKN1Q96NZ8 548 aa15.29■□□□□ 0.04
RNF139-201ENST00000303545 SLC25A10Q9UBX3 287 aaPredicted RBP15.29■□□□□ 0.04
RNF139-201ENST00000303545 NBASA2RRP1 2371 aa15.29■□□□□ 0.04
RNF139-201ENST00000303545 C15orf61A6NNL5 157 aa15.29■□□□□ 0.04
RNF139-201ENST00000303545 SRRM4A7MD48 611 aaKnown RBP15.29■□□□□ 0.04
RNF139-201ENST00000303545 MAS1LP35410 378 aa15.29■□□□□ 0.04
RNF139-201ENST00000303545 ACOT6Q3I5F7 207 aaPredicted RBP15.29■□□□□ 0.04
RNF139-201ENST00000303545 LYPD2Q6UXB3 125 aa15.29■□□□□ 0.04
RNF139-201ENST00000303545 OR51G1Q8NGK1 321 aa15.29■□□□□ 0.04
RNF139-201ENST00000303545 PARLQ9H300 379 aa15.29■□□□□ 0.04
RNF139-201ENST00000303545 SAP30LQ9HAJ7 183 aa15.29■□□□□ 0.04
RNF139-201ENST00000303545 SPTA1P02549 2419 aa15.28■□□□□ 0.04
RNF139-201ENST00000303545 TRGC2P03986 189 aa15.28■□□□□ 0.04
RNF139-201ENST00000303545 CT45A6P0DMU7 189 aa15.28■□□□□ 0.04
RNF139-201ENST00000303545 CT45A5P0DMU8 189 aa15.28■□□□□ 0.04
RNF139-201ENST00000303545 CT45A7P0DMV0 189 aa15.28■□□□□ 0.04
RNF139-201ENST00000303545 NDUFA6P56556 154 aa15.28■□□□□ 0.04
RNF139-201ENST00000303545 C4orf17Q53FE4 359 aa15.28■□□□□ 0.04
RNF139-201ENST00000303545 LINC00469Q8N7U9 141 aa15.28■□□□□ 0.04
RNF139-201ENST00000303545 NANPQ8TBE9 248 aa15.28■□□□□ 0.04
RNF139-201ENST00000303545 SEBOXQ9HB31 216 aaPredicted RBP15.28■□□□□ 0.04
RNF139-201ENST00000303545 IGHV2-5P01817 119 aa15.28■□□□□ 0.04
RNF139-201ENST00000303545 IGF2RP11717 2491 aa15.28■□□□□ 0.04
RNF139-201ENST00000303545 THBS3P49746 956 aa15.28■□□□□ 0.04
RNF139-201ENST00000303545 CST9LP1Q5W188 147 aa15.28■□□□□ 0.04
RNF139-201ENST00000303545 CA2P00918 260 aa15.27■□□□□ 0.04
RNF139-201ENST00000303545 KIR2DS2P43631 304 aa15.27■□□□□ 0.04
RNF139-201ENST00000303545 RPL31P62899 125 aaKnown RBP15.27■□□□□ 0.04
RNF139-201ENST00000303545 PDLIM3Q53GG5 364 aaPredicted RBP15.27■□□□□ 0.04
RNF139-201ENST00000303545 SIRT7Q9NRC8 400 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms