RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 GFOD1Q9NXC2 390 aa20.7■□□□□ 0.9
ROM1-201ENST00000278833 NDUFA6P56556 154 aa20.69■□□□□ 0.9
ROM1-201ENST00000278833 POU2AF1Q16633 256 aa20.69■□□□□ 0.9
ROM1-201ENST00000278833 C17orf58Q2M2W7 97 aa20.69■□□□□ 0.9
ROM1-201ENST00000278833 ANAPC16Q96DE5 110 aa20.69■□□□□ 0.9
ROM1-201ENST00000278833 SRD5A3Q9H8P0 318 aa20.69■□□□□ 0.9
ROM1-201ENST00000278833 KCNIP2Q9NS61 270 aa20.69■□□□□ 0.9
ROM1-201ENST00000278833 M0R1B8 84 aa20.69■□□□□ 0.9
ROM1-201ENST00000278833 ADTRPQ96IZ2 230 aa20.69■□□□□ 0.9
ROM1-201ENST00000278833 FAM234AQ9H0X4 552 aa20.69■□□□□ 0.9
ROM1-201ENST00000278833 GAR1Q9NY12 217 aaKnown RBP20.69■□□□□ 0.9
ROM1-201ENST00000278833 YIF1AO95070 293 aa20.68■□□□□ 0.9
ROM1-201ENST00000278833 TLE1Q04724 770 aa20.68■□□□□ 0.9
ROM1-201ENST00000278833 ADIRFQ15847 76 aa20.68■□□□□ 0.9
ROM1-201ENST00000278833 FAM180AQ6UWF9 173 aa20.68■□□□□ 0.9
ROM1-201ENST00000278833 ITLN1Q8WWA0 313 aa20.68■□□□□ 0.9
ROM1-201ENST00000278833 SSX3Q99909 188 aa20.68■□□□□ 0.9
ROM1-201ENST00000278833 HCFC1P51610 2035 aa20.68■□□□□ 0.9
ROM1-201ENST00000278833 DSCAML1Q8TD84 2053 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 ZFYVE26Q68DK2 2539 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 THBS3P49746 956 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 ZNF134P52741 427 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 STUMQ69YW2 141 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 C16orf82Q7Z2V1 217 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 TMEM140Q9NV12 185 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 FOXA2Q9Y261 457 aaPredicted RBP20.67■□□□□ 0.9
ROM1-201ENST00000278833 SMG1Q96Q15 3661 aaKnown RBP20.67■□□□□ 0.9
ROM1-201ENST00000278833 C15orf61A6NNL5 157 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 PDE6DO43924 150 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 CEACAM8P31997 349 aaPredicted RBP20.67■□□□□ 0.9
ROM1-201ENST00000278833 LTC4SQ16873 150 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 RPL39P5Q59GN2 51 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 SPNS3Q6ZMD2 512 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 OR4F5Q8NH21 305 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 ABHD5Q8WTS1 349 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 OR4F4Q96R69 305 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 IL19Q9UHD0 177 aa20.67■□□□□ 0.9
ROM1-201ENST00000278833 IGHV3OR15-7A0A075B7D8 119 aa20.66■□□□□ 0.9
ROM1-201ENST00000278833 KBTBD11-OT1A0A1B0GTJ5 212 aa20.66■□□□□ 0.9
ROM1-201ENST00000278833 FNDC10F2Z333 226 aa20.66■□□□□ 0.9
ROM1-201ENST00000278833 TMPRSS2O15393 492 aa20.66■□□□□ 0.9
ROM1-201ENST00000278833 TRGC1P0CF51 173 aa20.66■□□□□ 0.9
ROM1-201ENST00000278833 S100A2P29034 98 aa20.66■□□□□ 0.9
ROM1-201ENST00000278833 SPRNQ5BIV9 151 aa20.66■□□□□ 0.9
ROM1-201ENST00000278833 SPINK9Q5DT21 86 aa20.66■□□□□ 0.9
ROM1-201ENST00000278833 HIST3H2BBQ8N257 126 aa20.66■□□□□ 0.9
ROM1-201ENST00000278833 ZNRF1Q8ND25 227 aa20.66■□□□□ 0.9
ROM1-201ENST00000278833 ZNF439Q8NDP4 499 aa20.66■□□□□ 0.9
ROM1-201ENST00000278833 OR10A7Q8NGE5 316 aa20.66■□□□□ 0.9
ROM1-201ENST00000278833 FRZBQ92765 325 aa20.66■□□□□ 0.9
ROM1-201ENST00000278833 RPUSD4Q96CM3 377 aaKnown RBP20.66■□□□□ 0.9
ROM1-201ENST00000278833 RNF7Q9UBF6 113 aa20.66■□□□□ 0.9
ROM1-201ENST00000278833 ATRXP46100 2492 aa20.66■□□□□ 0.9
ROM1-201ENST00000278833 TANC2Q9HCD6 1990 aa20.65■□□□□ 0.9
ROM1-201ENST00000278833 PPP1R2P9O14990 202 aa20.65■□□□□ 0.9
ROM1-201ENST00000278833 FAM87AP0C7U9 286 aa20.65■□□□□ 0.9
ROM1-201ENST00000278833 TREML4Q6UXN2 200 aa20.65■□□□□ 0.9
ROM1-201ENST00000278833 OR51G1Q8NGK1 321 aa20.65■□□□□ 0.9
ROM1-201ENST00000278833 TCF19Q9Y242 345 aa20.65■□□□□ 0.9
ROM1-201ENST00000278833 HEATR1Q9H583 2144 aaKnown RBP20.65■□□□□ 0.9
ROM1-201ENST00000278833 F6UZH7 168 aa20.64■□□□□ 0.9
ROM1-201ENST00000278833 PAGE4O60829 102 aa20.64■□□□□ 0.9
ROM1-201ENST00000278833 CRYABP02511 175 aaKnown RBP20.64■□□□□ 0.9
ROM1-201ENST00000278833 CD99P14209 185 aa20.64■□□□□ 0.9
ROM1-201ENST00000278833 CORO2AQ92828 525 aa20.64■□□□□ 0.9
ROM1-201ENST00000278833 LSM4Q9Y4Z0 139 aaKnown RBP20.64■□□□□ 0.9
ROM1-201ENST00000278833 H7BYZ3 331 aa20.64■□□□□ 0.89
ROM1-201ENST00000278833 IFNA10P01566 189 aa20.64■□□□□ 0.89
ROM1-201ENST00000278833 GATAD1Q8WUU5 269 aa20.64■□□□□ 0.89
ROM1-201ENST00000278833 GGTLC1Q9BX51 225 aa20.64■□□□□ 0.89
ROM1-201ENST00000278833 HEYLQ9NQ87 328 aaPredicted RBP20.64■□□□□ 0.89
ROM1-201ENST00000278833 TMEM14BQ9NUH8 114 aa20.64■□□□□ 0.89
ROM1-201ENST00000278833 MIOXQ9UGB7 285 aa20.64■□□□□ 0.89
ROM1-201ENST00000278833 IGSF10Q6WRI0 2623 aa20.63■□□□□ 0.89
ROM1-201ENST00000278833 HMGB3O15347 200 aaKnown RBP20.63■□□□□ 0.89
ROM1-201ENST00000278833 SLC31A2O15432 143 aa20.63■□□□□ 0.89
ROM1-201ENST00000278833 HRASP01112 189 aa20.63■□□□□ 0.89
ROM1-201ENST00000278833 SRP14P37108 136 aaKnown RBP20.63■□□□□ 0.89
ROM1-201ENST00000278833 EDDM3BP56851 147 aa20.63■□□□□ 0.89
ROM1-201ENST00000278833 CT45A1Q5HYN5 189 aa20.63■□□□□ 0.89
ROM1-201ENST00000278833 CT45A3Q8NHU0 189 aa20.63■□□□□ 0.89
ROM1-201ENST00000278833 TMEM170AQ8WVE7 144 aa20.63■□□□□ 0.89
ROM1-201ENST00000278833 ABHD17AQ96GS6 310 aa20.63■□□□□ 0.89
ROM1-201ENST00000278833 CHODLQ9H9P2 273 aa20.63■□□□□ 0.89
ROM1-201ENST00000278833 DIDO1Q9BTC0 2240 aaKnown RBP20.63■□□□□ 0.89
ROM1-201ENST00000278833 CACNA1DQ01668 2161 aa20.63■□□□□ 0.89
ROM1-201ENST00000278833 TLN1Q9Y490 2541 aaKnown RBP20.63■□□□□ 0.89
ROM1-201ENST00000278833 PRR14LQ5THK1 2151 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 ZNF729A6NN14 1252 aaPredicted RBP20.62■□□□□ 0.89
ROM1-201ENST00000278833 C11orf94C9JXX5 98 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 IGHV2-70P01814 119 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 GYPAP02724 150 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 RPS16P62249 146 aaKnown RBP20.62■□□□□ 0.89
ROM1-201ENST00000278833 NUP37Q8NFH4 326 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 OR5B12Q96R08 314 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 MGST2Q99735 147 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 TRGV10A0A0A0MS01 117 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 MKRN2OSH3BPM6 223 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 RRHO14718 337 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 SPRY3O43610 288 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms