RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 IGKV1-5P01602 117 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 TCTAP57738 103 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 ZNF324BQ6AW86 544 aaPredicted RBP3.9□□□□□ -1.79
VPS13C-201ENST00000249837 TEPPQ6URK8 271 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 Q6ZRM9 215 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 GGNQ86UU5 652 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 OR5AU1Q8NGC0 362 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 OR1L8Q8NGR8 309 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 MBD3L1Q8WWY6 194 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 NDUFA2O43678 99 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 VMA21Q3ZAQ7 101 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 HIST1H2BLQ99880 126 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 LIME1Q9H400 295 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 PGPEP1LA6NFU8 196 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 GCGP01275 180 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 SSTR5P35346 364 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 C11orf42Q8N5U0 333 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 TCTEX1D1Q8N7M0 179 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 GNB4Q9HAV0 340 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 CBY1Q9Y3M2 126 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 GZMHP20718 246 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 GCHFRP30047 84 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 BRS3P32247 399 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 Q56UQ5 140 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 HIST3H2BBQ8N257 126 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 NHLRC2Q8NBF2 726 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 P2RX4Q99571 388 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 OPN3Q9H1Y3 402 aaPredicted RBP3.9□□□□□ -1.79
VPS13C-201ENST00000249837 REG1AP05451 166 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 ADH4P08319 380 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 MPV17P39210 176 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 RBPJQ06330 500 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 LRTM2Q8N967 370 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 MS4A5Q9H3V2 200 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 TRGV8A0A0C4DH27 118 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 TMEM210A6NLX4 147 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 C1QTNF9P0C862 333 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 SRIP30626 198 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 PTTG1IPP53801 180 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 STARD6P59095 220 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 GCSAMLQ5JQS6 135 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 C1QL4Q86Z23 238 aa3.9□□□□□ -1.79
VPS13C-201ENST00000249837 FOXD3Q9UJU5 478 aaPredicted RBP3.9□□□□□ -1.79
VPS13C-201ENST00000249837 TMPRSS2O15393 492 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 RSPO1Q2MKA7 263 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-201ENST00000249837 GFRALQ6UXV0 394 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 PDPNQ86YL7 162 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 ZNF596Q8TC21 504 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 CHRDL1Q9BU40 450 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 C1QTNF5Q9BXJ0 243 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 GOLT1BQ9Y3E0 138 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 C21orf140B9A014 251 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 RPLP1P05386 114 aaKnown RBP3.89□□□□□ -1.79
VPS13C-201ENST00000249837 SOD3P08294 240 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 PRB3Q04118 309 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-201ENST00000249837 C1orf147Q96MC9 270 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-201ENST00000249837 BET1LQ9NYM9 111 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 LOC102724200A0A096LPH7 203 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-201ENST00000249837 LILRA1O75019 489 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 CYC1P08574 325 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 CT45A10P0DMU9 189 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 RPL30P62888 115 aaKnown RBP3.89□□□□□ -1.79
VPS13C-201ENST00000249837 TMEM183AQ8IXX5 376 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 CSN1S1P47710 185 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 STPG3Q8N7X2 389 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 OR2V2Q96R30 315 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 SSBP3Q9BWW4 388 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-201ENST00000249837 PPP1R14DQ9NXH3 145 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 TIMM9Q9Y5J7 89 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 PTPRSQ13332 1948 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 FAM90A26D6RGX4 464 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 NUBP1P53384 320 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 LRRC75BQ2VPJ9 315 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 FAM201AQ5SY85 155 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 C10orf91Q5T1B1 145 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 ERASQ7Z444 233 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 SPTBN4Q9H254 2564 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 LTBP2Q14767 1821 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 ZNF716A6NP11 495 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 M0R296 226 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 CRYBB3P26998 211 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 ARL16Q0P5N6 197 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 LINC00469Q8N7U9 141 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 BCL2L2Q92843 193 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-201ENST00000249837 GMPPAQ96IJ6 420 aaPredicted RBP3.89□□□□□ -1.79
VPS13C-201ENST00000249837 PLA2G2EQ9NZK7 142 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 KIR2DS2P43631 304 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 NHLH1Q02575 133 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 ELOBQ15370 118 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 DCAF10Q5QP82 559 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 HCP5Q6MZN7 132 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 OR51G1Q8NGK1 321 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 IL19Q9UHD0 177 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 LOC102723996A0A087X1L8 192 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 TMEM250H0YL14 139 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 RRHO14718 337 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 MGST3O14880 152 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 COX5BP10606 129 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 HTR1DP28221 377 aa3.89□□□□□ -1.79
VPS13C-201ENST00000249837 LGALS4P56470 323 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms