RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 LSM3P62310 102 aaKnown RBP12.52□□□□□ -0.41
COLCA2-207ENST00000639470 VMA21Q3ZAQ7 101 aa12.52□□□□□ -0.41
COLCA2-207ENST00000639470 CNIH2Q6PI25 160 aa12.52□□□□□ -0.41
COLCA2-207ENST00000639470 IL34Q6ZMJ4 242 aa12.52□□□□□ -0.41
COLCA2-207ENST00000639470 TEX45Q8NA69 505 aa12.52□□□□□ -0.41
COLCA2-207ENST00000639470 TCTEX1D2Q8WW35 142 aa12.52□□□□□ -0.41
COLCA2-207ENST00000639470 WWC2-AS2Q96NR7 200 aa12.52□□□□□ -0.41
COLCA2-207ENST00000639470 CCL28Q9NRJ3 127 aa12.52□□□□□ -0.41
COLCA2-207ENST00000639470 ZMAT5Q9UDW3 170 aaKnown RBP12.52□□□□□ -0.41
COLCA2-207ENST00000639470 SMAD5-AS1Q9Y6J3 95 aa12.52□□□□□ -0.41
COLCA2-207ENST00000639470 RRASP10301 218 aa12.51□□□□□ -0.41
COLCA2-207ENST00000639470 EDN2P20800 178 aa12.51□□□□□ -0.41
COLCA2-207ENST00000639470 CD40LGP29965 261 aa12.51□□□□□ -0.41
COLCA2-207ENST00000639470 CBX3Q13185 183 aa12.51□□□□□ -0.41
COLCA2-207ENST00000639470 SSX9Q7RTT3 188 aa12.51□□□□□ -0.41
COLCA2-207ENST00000639470 SNAPC3Q92966 411 aa12.51□□□□□ -0.41
COLCA2-207ENST00000639470 ADTRPQ96IZ2 230 aa12.51□□□□□ -0.41
COLCA2-207ENST00000639470 DCSTAMPQ9H295 470 aa12.51□□□□□ -0.41
COLCA2-207ENST00000639470 SELENOKQ9Y6D0 94 aa12.51□□□□□ -0.41
COLCA2-207ENST00000639470 S4R3C0 116 aa12.51□□□□□ -0.41
COLCA2-207ENST00000639470 FRMD6-AS1P0C7T7 363 aa12.5□□□□□ -0.41
COLCA2-207ENST00000639470 KLF5Q13887 457 aaPredicted RBP12.5□□□□□ -0.41
COLCA2-207ENST00000639470 CDK10Q15131 360 aa12.5□□□□□ -0.41
COLCA2-207ENST00000639470 KCTD21Q4G0X4 260 aa12.5□□□□□ -0.41
COLCA2-207ENST00000639470 ZNF343Q6P1L6 599 aa12.5□□□□□ -0.41
COLCA2-207ENST00000639470 BEST4Q8NFU0 473 aa12.5□□□□□ -0.41
COLCA2-207ENST00000639470 SECTM1Q8WVN6 248 aa12.5□□□□□ -0.41
COLCA2-207ENST00000639470 OR4C12Q96R67 309 aa12.5□□□□□ -0.41
COLCA2-207ENST00000639470 AUNIPQ9H7T9 357 aa12.5□□□□□ -0.41
COLCA2-207ENST00000639470 AKIP1Q9NQ31 210 aa12.5□□□□□ -0.41
COLCA2-207ENST00000639470 NBEAL2Q6ZNJ1 2754 aa12.49□□□□□ -0.41
COLCA2-207ENST00000639470 IZUMO1RA6ND01 250 aa12.49□□□□□ -0.41
COLCA2-207ENST00000639470 TEX22C9J3V5 150 aa12.49□□□□□ -0.41
COLCA2-207ENST00000639470 H3BUA1 57 aa12.49□□□□□ -0.41
COLCA2-207ENST00000639470 MPPED1O15442 326 aa12.49□□□□□ -0.41
COLCA2-207ENST00000639470 IGHV3-23P01764 117 aa12.49□□□□□ -0.41
COLCA2-207ENST00000639470 OR9G9P0C7N8 305 aa12.49□□□□□ -0.41
COLCA2-207ENST00000639470 FCGR2CP31995 323 aa12.49□□□□□ -0.41
COLCA2-207ENST00000639470 RHOGP84095 191 aa12.49□□□□□ -0.41
COLCA2-207ENST00000639470 DCTN2Q13561 401 aaKnown RBP12.49□□□□□ -0.41
COLCA2-207ENST00000639470 ARL6IP1Q15041 203 aa12.49□□□□□ -0.41
COLCA2-207ENST00000639470 Q8N1Y9 231 aa12.49□□□□□ -0.41
COLCA2-207ENST00000639470 OSR1Q8TAX0 266 aaPredicted RBP12.49□□□□□ -0.41
COLCA2-207ENST00000639470 RANGRFQ9HD47 186 aaPredicted RBP12.49□□□□□ -0.41
COLCA2-207ENST00000639470 TNCP24821 2201 aa12.48□□□□□ -0.41
COLCA2-207ENST00000639470 BMPR1BO00238 502 aa12.48□□□□□ -0.41
COLCA2-207ENST00000639470 OR2J3O76001 311 aa12.48□□□□□ -0.41
COLCA2-207ENST00000639470 IGLV1-51P01701 117 aa12.48□□□□□ -0.41
COLCA2-207ENST00000639470 HLA-AP01891 365 aaKnown RBP12.48□□□□□ -0.41
COLCA2-207ENST00000639470 IL6RP08887 468 aaPredicted RBP12.48□□□□□ -0.41
COLCA2-207ENST00000639470 CTXN2P0C2S0 81 aa12.48□□□□□ -0.41
COLCA2-207ENST00000639470 AREGP15514 252 aa12.48□□□□□ -0.41
COLCA2-207ENST00000639470 RPS19P39019 145 aaKnown RBP12.48□□□□□ -0.41
COLCA2-207ENST00000639470 FXYD4P59646 89 aa12.48□□□□□ -0.41
COLCA2-207ENST00000639470 EXOSC2Q13868 293 aaKnown RBP12.48□□□□□ -0.41
COLCA2-207ENST00000639470 ADAMTSL5Q6ZMM2 481 aa12.48□□□□□ -0.41
COLCA2-207ENST00000639470 HOGA1Q86XE5 327 aa12.48□□□□□ -0.41
COLCA2-207ENST00000639470 MFSD4AQ8N468 514 aa12.48□□□□□ -0.41
COLCA2-207ENST00000639470 OR6Q1Q8NGQ2 317 aa12.48□□□□□ -0.41
COLCA2-207ENST00000639470 OR13F1Q8NGS4 319 aa12.48□□□□□ -0.41
COLCA2-207ENST00000639470 YIPF6Q96EC8 236 aa12.48□□□□□ -0.41
COLCA2-207ENST00000639470 PEF1Q9UBV8 284 aaKnown RBP12.48□□□□□ -0.41
COLCA2-207ENST00000639470 ETV7Q9Y603 341 aa12.48□□□□□ -0.41
COLCA2-207ENST00000639470 TRAV3A0A0B4J244 114 aa12.47□□□□□ -0.41
COLCA2-207ENST00000639470 CGB1A6NKQ9 187 aa12.47□□□□□ -0.41
COLCA2-207ENST00000639470 REG1AP05451 166 aa12.47□□□□□ -0.41
COLCA2-207ENST00000639470 CSN3P07498 182 aa12.47□□□□□ -0.41
COLCA2-207ENST00000639470 NHLRC4P0CG21 123 aaPredicted RBP12.47□□□□□ -0.41
COLCA2-207ENST00000639470 RPA2P15927 270 aa12.47□□□□□ -0.41
COLCA2-207ENST00000639470 ARPC4P59998 168 aa12.47□□□□□ -0.41
COLCA2-207ENST00000639470 PUSL1Q8N0Z8 303 aaKnown RBP12.47□□□□□ -0.41
COLCA2-207ENST00000639470 OR9G4Q8NGQ1 327 aa12.47□□□□□ -0.41
COLCA2-207ENST00000639470 FYTTD1Q96QD9 318 aaKnown RBP12.47□□□□□ -0.41
COLCA2-207ENST00000639470 PRELID3BQ9Y3B1 194 aa12.47□□□□□ -0.41
COLCA2-207ENST00000639470 KMT2CQ8NEZ4 4911 aaKnown RBP12.46□□□□□ -0.41
COLCA2-207ENST00000639470 TRBV9A0A0B4J1U6 114 aa12.46□□□□□ -0.41
COLCA2-207ENST00000639470 A0A0G2JLM5 398 aa12.46□□□□□ -0.41
COLCA2-207ENST00000639470 PPP5D1E7EU14 171 aa12.46□□□□□ -0.41
COLCA2-207ENST00000639470 SULT1C2O00338 296 aa12.46□□□□□ -0.41
COLCA2-207ENST00000639470 SCGNO76038 276 aa12.46□□□□□ -0.41
COLCA2-207ENST00000639470 PPYP01298 95 aa12.46□□□□□ -0.41
COLCA2-207ENST00000639470 ZP3P21754 424 aa12.46□□□□□ -0.41
COLCA2-207ENST00000639470 TMEM17Q86X19 198 aa12.46□□□□□ -0.41
COLCA2-207ENST00000639470 ANKRD13BQ86YJ7 626 aa12.46□□□□□ -0.41
COLCA2-207ENST00000639470 OR4S2Q8NH73 311 aa12.46□□□□□ -0.41
COLCA2-207ENST00000639470 SLC5A7Q9GZV3 580 aa12.46□□□□□ -0.41
COLCA2-207ENST00000639470 SORL1Q92673 2214 aa12.45□□□□□ -0.42
COLCA2-207ENST00000639470 AIREO43918 545 aa12.45□□□□□ -0.42
COLCA2-207ENST00000639470 ACTL6BO94805 426 aa12.45□□□□□ -0.42
COLCA2-207ENST00000639470 KBTBD11O94819 623 aa12.45□□□□□ -0.42
COLCA2-207ENST00000639470 NDUFB8O95169 186 aa12.45□□□□□ -0.42
COLCA2-207ENST00000639470 IGHV4-30-4P0DP06 118 aa12.45□□□□□ -0.42
COLCA2-207ENST00000639470 ZNF818PQ6ZRF7 136 aa12.45□□□□□ -0.42
COLCA2-207ENST00000639470 MMD2Q8IY49 270 aa12.45□□□□□ -0.42
COLCA2-207ENST00000639470 TMEM167AQ8TBQ9 72 aa12.45□□□□□ -0.42
COLCA2-207ENST00000639470 TMEM68Q96MH6 324 aa12.45□□□□□ -0.42
COLCA2-207ENST00000639470 RCHY1Q96PM5 261 aa12.45□□□□□ -0.42
COLCA2-207ENST00000639470 HSD17B10Q99714 261 aaKnown RBP12.45□□□□□ -0.42
COLCA2-207ENST00000639470 ELOVL1Q9BW60 279 aa12.45□□□□□ -0.42
COLCA2-207ENST00000639470 MRPS7Q9Y2R9 242 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms