RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 THBS3P49746 956 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 OR2B8PP59922 312 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 MRPS11P82912 194 aaKnown RBP16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 MEF2CQ06413 473 aaPredicted RBP16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 SPINK9Q5DT21 86 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 SSX9Q7RTT3 188 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 CENPVQ7Z7K6 275 aaPredicted RBP16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 LYG1Q8N1E2 194 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 OR52E5Q8NH55 327 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 OR4A16Q8NH70 328 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 VSIRQ9H7M9 311 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 PPIAL4AQ9Y536 164 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 ROS1P08922 2347 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 IFNA17P01571 189 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 FOLR2P14207 255 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 RPL35P42766 123 aaKnown RBP16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 SPCS3P61009 180 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 GNB2P62879 340 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 PDLIM3Q53GG5 364 aaPredicted RBP16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 VKORC1L1Q8N0U8 176 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 ADTRPQ96IZ2 230 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 TMEM106BQ9NUM4 274 aa16.22■□□□□ 0.19
PCDHB11-202ENST00000624887 PLA2G5P39877 138 aa16.21■□□□□ 0.19
PCDHB11-202ENST00000624887 AVPI1Q5T686 147 aa16.21■□□□□ 0.19
PCDHB11-202ENST00000624887 OR10A7Q8NGE5 316 aa16.21■□□□□ 0.19
PCDHB11-202ENST00000624887 MBD3L1Q8WWY6 194 aa16.21■□□□□ 0.19
PCDHB11-202ENST00000624887 CCL17Q92583 94 aa16.21■□□□□ 0.19
PCDHB11-202ENST00000624887 NEUROG1Q92886 237 aa16.21■□□□□ 0.19
PCDHB11-202ENST00000624887 MS4A5Q9H3V2 200 aa16.21■□□□□ 0.19
PCDHB11-202ENST00000624887 TMEM140Q9NV12 185 aa16.21■□□□□ 0.19
PCDHB11-202ENST00000624887 ADGRG4Q8IZF6 3080 aa16.21■□□□□ 0.18
PCDHB11-202ENST00000624887 SCAF4O95104 1147 aaKnown RBP16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 MEOX2P50222 304 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 AKR1D1P51857 326 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 RELBQ01201 579 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 VWC2Q2TAL6 325 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 FBXL19-AS1Q494R0 122 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 TMEM41BQ5BJD5 291 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 ZNF506Q5JVG8 444 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 SLC25A48Q6ZT89 311 aaKnown RBP16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 CLDND2Q8NHS1 167 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 DYNLRB1Q9NP97 96 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 POLEQ07864 2286 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 C15orf62A8K5M9 175 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 TNFRSF13BO14836 293 aaPredicted RBP16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 OR13C7P0DN81 318 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 APOBEC3AP31941 199 aaPredicted RBP16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 GNG10P50151 68 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 RPL31P62899 125 aaKnown RBP16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 ZNF726P1Q15940 193 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 HAGHQ16775 308 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 ZNF383Q8NA42 475 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 GAL3ST2Q9H3Q3 398 aa16.2■□□□□ 0.18
PCDHB11-202ENST00000624887 NCOR2Q9Y618 2525 aa16.19■□□□□ 0.18
PCDHB11-202ENST00000624887 SMG1Q96Q15 3661 aaKnown RBP16.19■□□□□ 0.18
PCDHB11-202ENST00000624887 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.19■□□□□ 0.18
PCDHB11-202ENST00000624887 TMEM8BA6NDV4 472 aa16.19■□□□□ 0.18
PCDHB11-202ENST00000624887 FCN3O75636 299 aa16.19■□□□□ 0.18
PCDHB11-202ENST00000624887 ARG1P05089 322 aa16.19■□□□□ 0.18
PCDHB11-202ENST00000624887 CD3EP07766 207 aa16.19■□□□□ 0.18
PCDHB11-202ENST00000624887 SFTPCP11686 197 aa16.19■□□□□ 0.18
PCDHB11-202ENST00000624887 ICAM4Q14773 271 aa16.19■□□□□ 0.18
PCDHB11-202ENST00000624887 EFNB3Q15768 340 aa16.19■□□□□ 0.18
PCDHB11-202ENST00000624887 ZNF429Q86V71 674 aa16.19■□□□□ 0.18
PCDHB11-202ENST00000624887 LURAP1LQ8IV03 231 aa16.19■□□□□ 0.18
PCDHB11-202ENST00000624887 ST6GALNAC3Q8NDV1 305 aa16.19■□□□□ 0.18
PCDHB11-202ENST00000624887 RCC1LQ96I51 464 aaKnown RBP16.19■□□□□ 0.18
PCDHB11-202ENST00000624887 YLPM1P49750 1951 aaKnown RBP16.19■□□□□ 0.18
PCDHB11-202ENST00000624887 HSPB1P04792 205 aaKnown RBP16.18■□□□□ 0.18
PCDHB11-202ENST00000624887 SOHLH1Q5JUK2 328 aa16.18■□□□□ 0.18
PCDHB11-202ENST00000624887 TRAV3A0A0B4J244 114 aa16.18■□□□□ 0.18
PCDHB11-202ENST00000624887 SRP19P09132 144 aaKnown RBP16.18■□□□□ 0.18
PCDHB11-202ENST00000624887 CHRNB4P30926 498 aa16.18■□□□□ 0.18
PCDHB11-202ENST00000624887 RPP30P78346 268 aaKnown RBP16.18■□□□□ 0.18
PCDHB11-202ENST00000624887 KHDC3LQ587J8 217 aa16.18■□□□□ 0.18
PCDHB11-202ENST00000624887 AWAT1Q58HT5 328 aa16.18■□□□□ 0.18
PCDHB11-202ENST00000624887 RHOVQ96L33 236 aa16.18■□□□□ 0.18
PCDHB11-202ENST00000624887 UNKLQ9H9P5 680 aaKnown RBP16.18■□□□□ 0.18
PCDHB11-202ENST00000624887 SMCO4Q9NRQ5 59 aa16.18■□□□□ 0.18
PCDHB11-202ENST00000624887 B9A039 149 aa16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 DAOP14920 347 aa16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 MDKP21741 143 aaPredicted RBP16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 VDAC2P45880 294 aaPredicted RBP16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 ELLP55199 621 aaPredicted RBP16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 RPS16P62249 146 aaKnown RBP16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 ZNF787Q6DD87 383 aa16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 HEPN1Q6WQI6 88 aa16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 ETV3LQ6ZN32 361 aa16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 SSX7Q7RTT5 188 aa16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 ZNF714Q96N38 554 aa16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 CLCC1Q96S66 551 aa16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 ZZEF1O43149 2961 aa16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 CCL21O00585 134 aa16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 FGF7P21781 194 aa16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 POU2AF1Q16633 256 aa16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 LCN15Q6UWW0 184 aa16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 RPS10P5Q9NQ39 176 aa16.17■□□□□ 0.18
PCDHB11-202ENST00000624887 ARFGEF3Q5TH69 2177 aa16.16■□□□□ 0.18
PCDHB11-202ENST00000624887 C7orf77A4D0Y5 90 aa16.16■□□□□ 0.18
PCDHB11-202ENST00000624887 FAM90A27PA6NNH2 459 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms