RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 OR4F5Q8NH21 305 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 YPEL2Q96QA6 119 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 OR4F4Q96R69 305 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 TMEM147Q9BVK8 224 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 TUBG2Q9NRH3 451 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 PCNX1Q96RV3 2341 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 CELA3AP09093 270 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 Q6ZWC4 215 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 Q8IYB0 196 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 OR2M7Q8NG81 312 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 RTL8AQ9BWD3 113 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 ZNF703Q9H7S9 590 aaPredicted RBP7.32□□□□□ -1.24
VCL-207ENST00000624354 PATZ1Q9HBE1 687 aaKnown RBP7.32□□□□□ -1.24
VCL-207ENST00000624354 HSPB7Q9UBY9 170 aa7.32□□□□□ -1.24
VCL-207ENST00000624354 KRASP01116 189 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 COX5AP20674 150 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 LCN2P80188 198 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 LYG1Q8N1E2 194 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 ZNF709Q8N972 641 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 OR10P1Q8NGE3 313 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 HSPB9Q9BQS6 159 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 VPS25Q9BRG1 176 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 POLDIP2Q9Y2S7 368 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 IL3RAP26951 378 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 FFAR4Q5NUL3 377 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 SPATA46Q5T0L3 261 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 FAM78BQ5VT40 261 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 MYPOPQ86VE0 399 aaPredicted RBP7.31□□□□□ -1.24
VCL-207ENST00000624354 UBALD2Q8IYN6 164 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 OR5T1Q8NG75 326 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 WDYHV1Q96HA8 205 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 BTF3L4Q96K17 158 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 MBNL3Q9NUK0 354 aaKnown RBP7.31□□□□□ -1.24
VCL-207ENST00000624354 WIPI2Q9Y4P8 454 aa7.31□□□□□ -1.24
VCL-207ENST00000624354 TNRC6AQ8NDV7 1962 aaKnown RBP7.31□□□□□ -1.24
VCL-207ENST00000624354 FAM166BA8MTA8 275 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 SH2D1BO14796 132 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 GYPAP02724 150 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 RPL15P61313 204 aaKnown RBP7.3□□□□□ -1.24
VCL-207ENST00000624354 IGFBP7Q16270 282 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 C6orf15Q6UXA7 325 aaPredicted RBP7.3□□□□□ -1.24
VCL-207ENST00000624354 ZBTB34Q8NCN2 500 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 OR4C5Q8NGB2 326 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 OR4B1Q8NGF8 309 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 CT55Q8WUE5 264 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 TXN2Q99757 166 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.3□□□□□ -1.24
VCL-207ENST00000624354 KCNIP1Q9NZI2 227 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 PXMP4Q9Y6I8 212 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 RELNP78509 3460 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 NCKAP5O14513 1909 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 RAC2P15153 192 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 G6PCP35575 357 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 CDKN1AP38936 164 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 PLA2G5P39877 138 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 MAGEA5P43359 124 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 CATR1Q13166 79 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 ABHD17BQ5VST6 288 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 GCNT2Q8N0V5 402 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 ZNF645Q8N7E2 425 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 ZNF738Q8NE65 137 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 NUDT10Q8NFP7 164 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 NANOS1Q8WY41 292 aaKnown RBP7.3□□□□□ -1.24
VCL-207ENST00000624354 NEIL1Q96FI4 390 aaPredicted RBP7.3□□□□□ -1.24
VCL-207ENST00000624354 CLN8Q9UBY8 286 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 LRRC30A6NM36 301 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 PAGE4O60829 102 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 RAMP3O60896 148 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 RBMXL2O75526 392 aaKnown RBP7.3□□□□□ -1.24
VCL-207ENST00000624354 NEURL1O76050 574 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 VENTXO95231 258 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 MT-CO3P00414 261 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 HNRNPA3P51991 378 aaKnown RBP7.3□□□□□ -1.24
VCL-207ENST00000624354 PMP22Q01453 160 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 ZNF816Q0VGE8 651 aaPredicted RBP7.3□□□□□ -1.24
VCL-207ENST00000624354 SCCPDHQ8NBX0 429 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 OR5AU1Q8NGC0 362 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 OR2D3Q8NGH3 330 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 GALMQ96C23 342 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 OR2D2Q9H210 308 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 PLA2G3Q9NZ20 509 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 UQCR10Q9UDW1 63 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 LAMTOR2Q9Y2Q5 125 aa7.3□□□□□ -1.24
VCL-207ENST00000624354 ODAMA1E959 279 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 GRIFINA4D1Z8 144 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 C19orf67A6NJJ6 358 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 PPBPP02775 128 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 ERVK11-1P61568 191 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 PPP1CBP62140 327 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 MAJINQ3KP22 176 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 CLEC2AQ6UVW9 174 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 SLC24A4Q8NFF2 622 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 GATAD1Q8WUU5 269 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 HES7Q9BYE0 225 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 SLC45A2Q9UMX9 530 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 CHTOPQ9Y3Y2 248 aaKnown RBP7.29□□□□□ -1.24
VCL-207ENST00000624354 FREM1Q5H8C1 2179 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 LOC105371242A0A075B767 164 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 C17orf112F2Z3M2 114 aa7.29□□□□□ -1.24
VCL-207ENST00000624354 CDIPTO14735 213 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms