RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 AJUBAQ96IF1 538 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 SNX22Q96L94 193 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 MDFIQ99750 246 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 SULT4A1Q9BR01 284 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 GINS3Q9BRX5 216 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 ZNF2Q9BSG1 426 aaPredicted RBP4.28□□□□□ -1.72
SHMT1-211ENST00000618902 C19orf24Q9BVV8 132 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 IFT22Q9H7X7 185 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 RAB9BQ9NP90 201 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 TREM1Q9NP99 234 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 CACFD1Q9UGQ2 172 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 ZNF230Q9UIE0 474 aaPredicted RBP4.28□□□□□ -1.72
SHMT1-211ENST00000618902 ST3GAL6Q9Y274 331 aa4.28□□□□□ -1.72
SHMT1-211ENST00000618902 TRBV6-6A0A0A6YYG2 114 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 IGHV1-69DA0A0B4J2H0 117 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 CENPVL3A0A0U1RRI6 287 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 hADV38S2A0JD32 116 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 ODAMA1E959 279 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 CXorf65A6NEN9 183 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 B4DEV8 164 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 H0YIZ8 118 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 SH2D1BO14796 132 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 MGST3O14880 152 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 SOX15O60248 233 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 PDCD6O75340 191 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 DFFBO76075 338 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 OR7C1O76099 320 aaPredicted RBP4.27□□□□□ -1.73
SHMT1-211ENST00000618902 NDUFA7O95182 113 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 TSPAN15O95858 294 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 IGHV1-69P01742 117 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 HBE1P02100 147 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 CRYBA1P05813 215 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 SPP1P10451 314 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 ZNF44P15621 663 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 CHATP28329 748 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 FCGR2CP31995 323 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 PIGPP57054 158 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 CD81P60033 236 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 RAB5BP61020 215 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 RPL31P62899 125 aaKnown RBP4.27□□□□□ -1.73
SHMT1-211ENST00000618902 SRSF2Q01130 221 aaKnown RBP4.27□□□□□ -1.73
SHMT1-211ENST00000618902 AESQ08117 197 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 RAB32Q13637 225 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 PMS2P11Q13670 270 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 TMEM187Q14656 261 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 ATXN7L3Q14CW9 347 aaPredicted RBP4.27□□□□□ -1.73
SHMT1-211ENST00000618902 RHEBQ15382 184 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 KRTAP24-1Q3LI83 254 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 TMEM30BQ3MIR4 351 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 LINC01559Q495D7 138 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 TMEM268Q5VZI3 342 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 RUSC1-AS1Q66K80 236 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 FAM53AQ6NSI3 398 aaPredicted RBP4.27□□□□□ -1.73
SHMT1-211ENST00000618902 SHISA2Q6UWI4 295 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 Q6YL49 198 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 CMTM1Q8IZ96 169 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 LINC00518Q8N0U6 118 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 PUSL1Q8N0Z8 303 aaKnown RBP4.27□□□□□ -1.73
SHMT1-211ENST00000618902 GAPTQ8N292 157 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 ZNF565Q8N9K5 539 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.27□□□□□ -1.73
SHMT1-211ENST00000618902 DMBX1Q8NFW5 382 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 OR10A7Q8NGE5 316 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 OR13A1Q8NGR1 328 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 GLYATL2Q8WU03 294 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 C22orf15Q8WYQ4 148 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 MOB3AQ96BX8 217 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 RBMXL1Q96E39 390 aaKnown RBP4.27□□□□□ -1.73
SHMT1-211ENST00000618902 KIRREL1Q96J84 757 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 AKR1E2Q96JD6 320 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 OR10C1Q96KK4 312 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 TMEM56Q96MV1 263 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 ZNF48Q96MX3 618 aaPredicted RBP4.27□□□□□ -1.73
SHMT1-211ENST00000618902 RSRP1Q9BUV0 290 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 MEGF9Q9H1U4 602 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 NAA60Q9H7X0 242 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 SIRT7Q9NRC8 400 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 GSKIPQ9P0R6 139 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 ONECUT1Q9UBC0 465 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 PITPNC1Q9UKF7 332 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 UBE2J1Q9Y385 318 aaPredicted RBP4.27□□□□□ -1.73
SHMT1-211ENST00000618902 FAM96BQ9Y3D0 163 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 TBL2Q9Y4P3 447 aaKnown RBP4.27□□□□□ -1.73
SHMT1-211ENST00000618902 LINC00312Q9Y6C7 94 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 TMEM56-RWDD3S4R434 201 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 WNK1Q9H4A3 2382 aa4.27□□□□□ -1.73
SHMT1-211ENST00000618902 MEGF8Q7Z7M0 2845 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 TRAV1-1A0A0B4J248 108 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 TRAV40A0A0B4J280 105 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 MDFIC2A0A1B0GVS7 189 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 A0A1W2PRD5 423 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 A0A1W2PRF3 423 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 A0A1W2PRM7 423 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 C17orf98A8MV24 154 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 C1orf196B1AJZ1 125 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 C15orf65H3BRN8 121 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 CCSO14618 274 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 MPPED1O15442 326 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 MED6O75586 246 aa4.26□□□□□ -1.73
SHMT1-211ENST00000618902 VENTXO95231 258 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms