RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 IGLL1P15814 213 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 PI3P19957 117 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 DUTP33316 252 aaKnown RBP4.71□□□□□ -1.66
LINC01538-201ENST00000588074 GLRXP35754 106 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 ZNF121P58317 390 aaPredicted RBP4.71□□□□□ -1.66
LINC01538-201ENST00000588074 PPP1CBP62140 327 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 SLC35B1P78383 322 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 CDK5R1Q15078 307 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 PRR30Q53SZ7 412 aaPredicted RBP4.71□□□□□ -1.66
LINC01538-201ENST00000588074 CT45A1Q5HYN5 189 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 OR10J3Q5JRS4 329 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 TRIM40Q6P9F5 258 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 ATP6V0E2Q8NHE4 81 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 CT45A3Q8NHU0 189 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 BORCS7Q96B45 105 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 CDX2Q99626 313 aaPredicted RBP4.71□□□□□ -1.66
LINC01538-201ENST00000588074 EBPLQ9BY08 206 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 OR2D2Q9H210 308 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 AAMDCQ9H7C9 122 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 HES4Q9HCC6 221 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 PRSS16Q9NQE7 514 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 KCNS2Q9ULS6 477 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 B9D1Q9UPM9 204 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 ZNF257Q9Y2Q1 563 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 NSG2Q9Y328 171 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 IER3IP1Q9Y5U9 82 aa4.71□□□□□ -1.66
LINC01538-201ENST00000588074 TTC3P53804 2025 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 ANKRD36A6QL64 1941 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 MCM3APO60318 1980 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 A0A1W2PPV9 198 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 MANSC4A6NHS7 340 aaPredicted RBP4.7□□□□□ -1.66
LINC01538-201ENST00000588074 CLDN5O00501 218 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 ISLRO14498 428 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 FOXS1O43638 330 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 BCL2P10415 239 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 HIST1H1CP16403 213 aaKnown RBP4.7□□□□□ -1.66
LINC01538-201ENST00000588074 LIM2P55344 173 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 RPS28P62857 69 aaKnown RBP4.7□□□□□ -1.66
LINC01538-201ENST00000588074 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.7□□□□□ -1.66
LINC01538-201ENST00000588074 SHISA6Q6ZSJ9 500 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 CLDN19Q8N6F1 224 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 SYT8Q8NBV8 401 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 MRPL30Q8TCC3 161 aaKnown RBP4.7□□□□□ -1.66
LINC01538-201ENST00000588074 LHX4Q969G2 390 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 SCGB3A2Q96PL1 93 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 ADOQ96SZ5 270 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 ATP5SQ99766 215 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 MAP1LC3AQ9H492 121 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 Q9H8V8 135 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 TMEM30AQ9NV96 361 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 C1RLQ9NZP8 487 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 PIGLQ9Y2B2 252 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 SOX21Q9Y651 276 aaPredicted RBP4.7□□□□□ -1.66
LINC01538-201ENST00000588074 ZNF831Q5JPB2 1677 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 TRGV10A0A0A0MS01 117 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 TRBV9A0A0B4J1U6 114 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 FAM90A26D6RGX4 464 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 FNDC10F2Z333 226 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 H3BUT2 72 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 PLPP3O14495 311 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 OR7C1O76099 320 aaPredicted RBP4.7□□□□□ -1.66
LINC01538-201ENST00000588074 STK17BO94768 372 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 KBTBD11O94819 623 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 NTF3P20783 257 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 VDAC1P21796 283 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 CRYBB3P26998 211 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 CXCL12P48061 93 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 RPS11P62280 158 aaKnown RBP eCLIP4.7□□□□□ -1.66
LINC01538-201ENST00000588074 EWSR1Q01844 656 aaKnown RBP eCLIP4.7□□□□□ -1.66
LINC01538-201ENST00000588074 POU3F1Q03052 451 aaPredicted RBP4.7□□□□□ -1.66
LINC01538-201ENST00000588074 ZNF85Q03923 595 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 MFGE8Q08431 387 aaPredicted RBP4.7□□□□□ -1.66
LINC01538-201ENST00000588074 PSG7Q13046 419 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 CD226Q15762 336 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 Q6AWC8 147 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 PIP4P1Q86T03 277 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 OOSP2Q86WS3 158 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 TMEM99Q8N816 258 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 OR51A4Q8NGJ6 313 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 OR1L3Q8NH93 324 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 SGMS2Q8NHU3 365 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 ZNF502Q8TBZ5 544 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 MAL2Q969L2 176 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 MRPL24Q96A35 216 aaKnown RBP4.7□□□□□ -1.66
LINC01538-201ENST00000588074 FLYWCH2Q96CP2 140 aaKnown RBP4.7□□□□□ -1.66
LINC01538-201ENST00000588074 DUX3Q96PT4 197 aa4.7□□□□□ -1.66
LINC01538-201ENST00000588074 ANK1P16157 1881 aa4.69□□□□□ -1.66
LINC01538-201ENST00000588074 TRAV18A0A075B6X5 111 aa4.69□□□□□ -1.66
LINC01538-201ENST00000588074 CASTOR2A6NHX0 329 aa4.69□□□□□ -1.66
LINC01538-201ENST00000588074 CCDC179H3BU77 68 aa4.69□□□□□ -1.66
LINC01538-201ENST00000588074 SOCS1O15524 211 aa4.69□□□□□ -1.66
LINC01538-201ENST00000588074 ZNF324O75467 553 aaPredicted RBP4.69□□□□□ -1.66
LINC01538-201ENST00000588074 CPSF4O95639 269 aaKnown RBP4.69□□□□□ -1.66
LINC01538-201ENST00000588074 PVRP15151 417 aa4.69□□□□□ -1.66
LINC01538-201ENST00000588074 GPR183P32249 361 aa4.69□□□□□ -1.66
LINC01538-201ENST00000588074 RPL23P62829 140 aaKnown RBP4.69□□□□□ -1.66
LINC01538-201ENST00000588074 FMODQ06828 376 aa4.69□□□□□ -1.66
LINC01538-201ENST00000588074 EDDM3AQ14507 147 aa4.69□□□□□ -1.66
LINC01538-201ENST00000588074 ZNF146Q15072 292 aa4.69□□□□□ -1.66
LINC01538-201ENST00000588074 CCL15Q16663 113 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms