RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 TPI1P60174 286 aa0.82□□□□□ -2.28
SMCHD1-207ENST00000581711 FABP5Q01469 135 aa0.82□□□□□ -2.28
SMCHD1-207ENST00000581711 JOSD1Q15040 202 aaPredicted RBP0.82□□□□□ -2.28
SMCHD1-207ENST00000581711 RASSF6Q6ZTQ3 369 aa0.82□□□□□ -2.28
SMCHD1-207ENST00000581711 LFNGQ8NES3 379 aa0.82□□□□□ -2.28
SMCHD1-207ENST00000581711 OR5L1Q8NGL2 311 aa0.82□□□□□ -2.28
SMCHD1-207ENST00000581711 RAB2BQ8WUD1 216 aa0.82□□□□□ -2.28
SMCHD1-207ENST00000581711 SLC7A6Q92536 515 aa0.82□□□□□ -2.28
SMCHD1-207ENST00000581711 TMA16Q96EY4 203 aaKnown RBP0.82□□□□□ -2.28
SMCHD1-207ENST00000581711 ADAT1Q9BUB4 502 aaKnown RBP0.82□□□□□ -2.28
SMCHD1-207ENST00000581711 DSTQ03001 7570 aaKnown RBP0.82□□□□□ -2.28
SMCHD1-207ENST00000581711 CCRL2O00421 344 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 PLA2G10O15496 165 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 YKT6O15498 198 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 ORC5O43913 435 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 MRPS14O60783 128 aaKnown RBP0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 MT-CO2P00403 227 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 SERPINA7P05543 415 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 TFPTP0C1Z6 253 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 FXYD7P58549 80 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 ANGPT1Q15389 498 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 Q1T7F1 81 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 FAM173BQ6P4H8 233 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 SPATA24Q86W54 205 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 TIPINQ9BVW5 301 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 TP53TG1Q9Y2A0 90 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 PCLOQ9Y6V0 5065 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 SYNE2Q8WXH0 6885 aaKnown RBP0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 RIMS2Q9UQ26 1411 aa0.81□□□□□ -2.28
SMCHD1-207ENST00000581711 INTS1Q8N201 2190 aaKnown RBP0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 TRAV7A0A075B6U4 112 aa0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 MEIKINA0A087WXM9 373 aa0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 TRAV38-1A0A0B4J264 116 aa0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 F8VZ95 297 aa0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 H7C2G1 150 aa0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 TOX3O15405 576 aaPredicted RBP0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 ORM1P02763 201 aa0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 PPBPP02775 128 aa0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 TAS2R20P59543 309 aa0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 HLA-DRB3P79483 266 aa0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 ARHGAP11BQ3KRB8 267 aa0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 MBD3L1Q8WWY6 194 aa0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 ZNHIT6Q9NWK9 470 aaKnown RBP0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 CUL9Q8IWT3 2517 aa0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 A0A1W2PP64 1363 aa0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 FLT4P35916 1363 aa0.8□□□□□ -2.28
SMCHD1-207ENST00000581711 A0A0J9YW62 118 aa0.79□□□□□ -2.28
SMCHD1-207ENST00000581711 TMEM269A0A1B0GVZ9 245 aa0.79□□□□□ -2.28
SMCHD1-207ENST00000581711 FTCDNL1E5RQL4 147 aa0.79□□□□□ -2.28
SMCHD1-207ENST00000581711 IL6P05231 212 aa0.79□□□□□ -2.28
SMCHD1-207ENST00000581711 RPSAP08865 295 aaKnown RBP0.79□□□□□ -2.28
SMCHD1-207ENST00000581711 RAB14P61106 215 aa0.79□□□□□ -2.28
SMCHD1-207ENST00000581711 PLCXD2Q0VAA5 305 aa0.79□□□□□ -2.28
SMCHD1-207ENST00000581711 Q8N2B8 174 aa0.79□□□□□ -2.28
SMCHD1-207ENST00000581711 C9orf163Q8N9P6 203 aa0.79□□□□□ -2.28
SMCHD1-207ENST00000581711 OR52A5Q9H2C5 316 aa0.79□□□□□ -2.28
SMCHD1-207ENST00000581711 MS4A6AQ9H2W1 248 aa0.79□□□□□ -2.28
SMCHD1-207ENST00000581711 NAT8Q9UHE5 227 aa0.79□□□□□ -2.28
SMCHD1-207ENST00000581711 MUC2Q02817 5179 aa0.79□□□□□ -2.28
SMCHD1-207ENST00000581711 MICAL3Q7RTP6 2002 aa0.78□□□□□ -2.28
SMCHD1-207ENST00000581711 TRPC5OSA6NMA1 111 aa0.78□□□□□ -2.28
SMCHD1-207ENST00000581711 CREBL2O60519 120 aaPredicted RBP0.78□□□□□ -2.28
SMCHD1-207ENST00000581711 SCN2BO60939 215 aa0.78□□□□□ -2.28
SMCHD1-207ENST00000581711 PSMB8P28062 276 aa0.78□□□□□ -2.28
SMCHD1-207ENST00000581711 CD79BP40259 229 aa0.78□□□□□ -2.28
SMCHD1-207ENST00000581711 RPS24P62847 133 aaKnown RBP0.78□□□□□ -2.28
SMCHD1-207ENST00000581711 LRRC75BQ2VPJ9 315 aa0.78□□□□□ -2.28
SMCHD1-207ENST00000581711 ZNF514Q96K75 400 aaPredicted RBP0.78□□□□□ -2.28
SMCHD1-207ENST00000581711 BBS2Q9BXC9 721 aa0.78□□□□□ -2.28
SMCHD1-207ENST00000581711 ROS1P08922 2347 aa0.78□□□□□ -2.28
SMCHD1-207ENST00000581711 NEBP20929 6669 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 FSIP2Q5CZC0 6907 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 C5orf49A4QMS7 147 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 F8W036 122 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 COX7A2LO14548 114 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 STX10O60499 249 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 PET100P0DJ07 73 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 PRB4P10163 310 aaPredicted RBP0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 CCL5P13501 91 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 SLCO1A2P46721 670 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 AP1S1P61966 158 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 FKBP1AP62942 108 aaKnown RBP0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 NAA40Q86UY6 237 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 SYCE1Q8N0S2 351 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 ASB13Q8WXK3 278 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 ODF3Q96PU9 254 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 SLC22A4Q9H015 551 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 HRASLSQ9HDD0 168 aa0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 SCAF11Q99590 1463 aaKnown RBP0.77□□□□□ -2.29
SMCHD1-207ENST00000581711 TEX50A0A1B0GTY4 177 aa0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 TINCRA0A1B0GVN0 87 aa0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 TRAPPC13A5PLN9 417 aa0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 IQCF5A8MTL0 148 aa0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 TRAPPC2LH3BP13 241 aa0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 TRGC1P0CF51 173 aa0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 ALDH3A1P30838 453 aa0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 CCR7P32248 378 aa0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 EMP1P54849 157 aa0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 RPL30P62888 115 aaKnown RBP0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 ACSM3Q53FZ2 586 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 1057.1 ms