RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 VKORC1L1Q8N0U8 176 aa14.91□□□□□ -0.02
SMPD3-211ENST00000568373 OR10A7Q8NGE5 316 aa14.91□□□□□ -0.02
SMPD3-211ENST00000568373 OR4A16Q8NH70 328 aa14.91□□□□□ -0.02
SMPD3-211ENST00000568373 RELNP78509 3460 aa14.91□□□□□ -0.02
SMPD3-211ENST00000568373 PLAUP00749 431 aa14.9□□□□□ -0.02
SMPD3-211ENST00000568373 IFNA17P01571 189 aa14.9□□□□□ -0.02
SMPD3-211ENST00000568373 NPBWR1P48145 328 aa14.9□□□□□ -0.02
SMPD3-211ENST00000568373 SERF2P84101 59 aa14.9□□□□□ -0.02
SMPD3-211ENST00000568373 ATP6V1FQ16864 119 aa14.9□□□□□ -0.02
SMPD3-211ENST00000568373 SFT2D1Q8WV19 159 aa14.9□□□□□ -0.02
SMPD3-211ENST00000568373 TAF15Q92804 592 aaKnown RBP eCLIP14.9□□□□□ -0.02
SMPD3-211ENST00000568373 PINX1Q96BK5 328 aaKnown RBP14.9□□□□□ -0.02
SMPD3-211ENST00000568373 ZNF383Q8NA42 475 aa14.89□□□□□ -0.03
SMPD3-211ENST00000568373 OR10P1Q8NGE3 313 aa14.89□□□□□ -0.03
SMPD3-211ENST00000568373 TMEM147Q9BVK8 224 aa14.89□□□□□ -0.03
SMPD3-211ENST00000568373 SMDT1Q9H4I9 107 aa14.89□□□□□ -0.03
SMPD3-211ENST00000568373 TMEM140Q9NV12 185 aa14.89□□□□□ -0.03
SMPD3-211ENST00000568373 CISD1Q9NZ45 108 aaKnown RBP14.89□□□□□ -0.03
SMPD3-211ENST00000568373 KIAA1456Q9P272 454 aa14.89□□□□□ -0.03
SMPD3-211ENST00000568373 LY86O95711 162 aa14.89□□□□□ -0.03
SMPD3-211ENST00000568373 HBE1P02100 147 aa14.89□□□□□ -0.03
SMPD3-211ENST00000568373 SPCS3P61009 180 aa14.89□□□□□ -0.03
SMPD3-211ENST00000568373 ADORA2A-AS1P86434 159 aa14.89□□□□□ -0.03
SMPD3-211ENST00000568373 LYPD2Q6UXB3 125 aa14.89□□□□□ -0.03
SMPD3-211ENST00000568373 OR52E5Q8NH55 327 aa14.89□□□□□ -0.03
SMPD3-211ENST00000568373 ZNF714Q96N38 554 aa14.89□□□□□ -0.03
SMPD3-211ENST00000568373 RPRMQ9NS64 109 aa14.89□□□□□ -0.03
SMPD3-211ENST00000568373 IGHV1-69-2A0A0G2JMI3 117 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 NDUFB3O43676 98 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 DAOP14920 347 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 RELBQ01201 579 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 PDLIM3Q53GG5 364 aaPredicted RBP14.88□□□□□ -0.03
SMPD3-211ENST00000568373 LRRC10Q5BKY1 277 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 TMEM200BQ69YZ2 307 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 HEPN1Q6WQI6 88 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 USP24Q9UPU5 2620 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 TRAV1-1A0A0B4J248 108 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 RBFOX3A6NFN3 312 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 SIAH2O43255 324 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 CCL3L1P16619 93 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 ERVFRD-1P60508 538 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 RAB2AP61019 212 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 GNB2P62879 340 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 TMEM88Q6PEY1 159 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 CLRN3Q8NCR9 226 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 RARRES2Q99969 163 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 SLC35B3Q9H1N7 401 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 KAAG1Q9UBP8 84 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 TIMM9Q9Y5J7 89 aa14.88□□□□□ -0.03
SMPD3-211ENST00000568373 TRAV3A0A0B4J244 114 aa14.87□□□□□ -0.03
SMPD3-211ENST00000568373 C15orf62A8K5M9 175 aa14.87□□□□□ -0.03
SMPD3-211ENST00000568373 DHRS7BQ6IAN0 325 aaPredicted RBP14.87□□□□□ -0.03
SMPD3-211ENST00000568373 ZNF429Q86V71 674 aa14.87□□□□□ -0.03
SMPD3-211ENST00000568373 H1FXQ92522 213 aaKnown RBP14.87□□□□□ -0.03
SMPD3-211ENST00000568373 RBMXL1Q96E39 390 aaKnown RBP14.87□□□□□ -0.03
SMPD3-211ENST00000568373 RHOVQ96L33 236 aa14.87□□□□□ -0.03
SMPD3-211ENST00000568373 VSIRQ9H7M9 311 aa14.87□□□□□ -0.03
SMPD3-211ENST00000568373 CTSZQ9UBR2 303 aa14.87□□□□□ -0.03
SMPD3-211ENST00000568373 SCAF4O95104 1147 aaKnown RBP14.86□□□□□ -0.03
SMPD3-211ENST00000568373 ARG1P05089 322 aa14.86□□□□□ -0.03
SMPD3-211ENST00000568373 CDSNQ15517 529 aa14.86□□□□□ -0.03
SMPD3-211ENST00000568373 VWC2Q2TAL6 325 aa14.86□□□□□ -0.03
SMPD3-211ENST00000568373 CENPVQ7Z7K6 275 aaPredicted RBP14.86□□□□□ -0.03
SMPD3-211ENST00000568373 CLCC1Q96S66 551 aa14.86□□□□□ -0.03
SMPD3-211ENST00000568373 ZNRD1Q9P1U0 126 aa14.86□□□□□ -0.03
SMPD3-211ENST00000568373 LOC105371267A0A1B0GV96 52 aa14.86□□□□□ -0.03
SMPD3-211ENST00000568373 DVL1O14640 695 aa14.86□□□□□ -0.03
SMPD3-211ENST00000568373 RPS16P62249 146 aaKnown RBP14.86□□□□□ -0.03
SMPD3-211ENST00000568373 CBLN2Q8IUK8 224 aa14.86□□□□□ -0.03
SMPD3-211ENST00000568373 MUC15Q8N387 334 aa14.86□□□□□ -0.03
SMPD3-211ENST00000568373 TET2Q6N021 2002 aaPredicted RBP14.86□□□□□ -0.03
SMPD3-211ENST00000568373 C15orf61A6NNL5 157 aa14.85□□□□□ -0.03
SMPD3-211ENST00000568373 NDUFA2O43678 99 aa14.85□□□□□ -0.03
SMPD3-211ENST00000568373 CT45A6P0DMU7 189 aa14.85□□□□□ -0.03
SMPD3-211ENST00000568373 CT45A5P0DMU8 189 aa14.85□□□□□ -0.03
SMPD3-211ENST00000568373 CT45A7P0DMV0 189 aa14.85□□□□□ -0.03
SMPD3-211ENST00000568373 ATF4P18848 351 aaPredicted RBP14.85□□□□□ -0.03
SMPD3-211ENST00000568373 POU2AF1Q16633 256 aa14.85□□□□□ -0.03
SMPD3-211ENST00000568373 HFEQ30201 348 aa14.85□□□□□ -0.03
SMPD3-211ENST00000568373 TMEM41BQ5BJD5 291 aa14.85□□□□□ -0.03
SMPD3-211ENST00000568373 OR4A47Q6IF82 309 aa14.85□□□□□ -0.03
SMPD3-211ENST00000568373 CA5BP1Q8WTZ4 195 aa14.85□□□□□ -0.03
SMPD3-211ENST00000568373 HRASP01112 189 aa14.85□□□□□ -0.03
SMPD3-211ENST00000568373 VDAC2P45880 294 aaPredicted RBP14.85□□□□□ -0.03
SMPD3-211ENST00000568373 RPP30P78346 268 aaKnown RBP14.85□□□□□ -0.03
SMPD3-211ENST00000568373 ZNF726P1Q15940 193 aa14.85□□□□□ -0.03
SMPD3-211ENST00000568373 ZNF672Q499Z4 452 aaPredicted RBP14.85□□□□□ -0.03
SMPD3-211ENST00000568373 ZNF833PQ6ZTB9 187 aa14.85□□□□□ -0.03
SMPD3-211ENST00000568373 MBD3L1Q8WWY6 194 aa14.85□□□□□ -0.03
SMPD3-211ENST00000568373 RCC1LQ96I51 464 aaKnown RBP14.85□□□□□ -0.03
SMPD3-211ENST00000568373 FGF7P21781 194 aa14.84□□□□□ -0.03
SMPD3-211ENST00000568373 LOXP28300 417 aaPredicted RBP14.84□□□□□ -0.03
SMPD3-211ENST00000568373 ELLP55199 621 aaPredicted RBP14.84□□□□□ -0.03
SMPD3-211ENST00000568373 HAGHQ16775 308 aa14.84□□□□□ -0.03
SMPD3-211ENST00000568373 CLDND2Q8NHS1 167 aa14.84□□□□□ -0.03
SMPD3-211ENST00000568373 HEYLQ9NQ87 328 aaPredicted RBP14.84□□□□□ -0.03
SMPD3-211ENST00000568373 TCF19Q9Y242 345 aa14.84□□□□□ -0.03
SMPD3-211ENST00000568373 ABCA4P78363 2273 aa14.84□□□□□ -0.03
SMPD3-211ENST00000568373 OR13C7P0DN81 318 aa14.83□□□□□ -0.03
SMPD3-211ENST00000568373 RTL8BQ17RB0 113 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms