RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 IGSF11Q5DX21 431 aa8.44□□□□□ -1.06
TPM1-212ENST00000558347 NMSQ5H8A3 153 aa8.44□□□□□ -1.06
TPM1-212ENST00000558347 TEX36Q5VZQ5 186 aa8.44□□□□□ -1.06
TPM1-212ENST00000558347 DPPA3Q6W0C5 159 aa8.44□□□□□ -1.06
TPM1-212ENST00000558347 MOB1BQ7L9L4 216 aa8.44□□□□□ -1.06
TPM1-212ENST00000558347 IQCF2Q8IXL9 164 aa8.44□□□□□ -1.06
TPM1-212ENST00000558347 CMTM1Q8IZ96 169 aa8.44□□□□□ -1.06
TPM1-212ENST00000558347 SUMF2Q8NBJ7 301 aa8.44□□□□□ -1.06
TPM1-212ENST00000558347 RXFP4Q8TDU9 374 aa8.44□□□□□ -1.06
TPM1-212ENST00000558347 BSCL2Q96G97 398 aaPredicted RBP8.44□□□□□ -1.06
TPM1-212ENST00000558347 CABLES2Q9BTV7 478 aa8.44□□□□□ -1.06
TPM1-212ENST00000558347 HIPK2Q9H2X6 1198 aa8.44□□□□□ -1.06
TPM1-212ENST00000558347 LYRM2Q9NU23 88 aaPredicted RBP8.44□□□□□ -1.06
TPM1-212ENST00000558347 IGHV3OR15-7A0A075B7D8 119 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 TRAV40A0A0B4J280 105 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 MEX3AA1L020 520 aaKnown RBP8.43□□□□□ -1.06
TPM1-212ENST00000558347 COLCA2A8K830 154 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 C9JQL5 133 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 SLC33A1O00400 549 aaPredicted RBP8.43□□□□□ -1.06
TPM1-212ENST00000558347 OR2H2O95918 312 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 PRH1P02810 166 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 PSG2P11465 335 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 ZNF44P15621 663 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 VAMP2P63027 116 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 ID3Q02535 119 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 ZNF616Q08AN1 781 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 RHEBQ15382 184 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 DUX4L9Q6RFH8 374 aaPredicted RBP8.43□□□□□ -1.06
TPM1-212ENST00000558347 C12orf54Q6X4T0 127 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 GAPTQ8N292 157 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 FGFRL1Q8N441 504 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 GNPNAT1Q96EK6 184 aaPredicted RBP8.43□□□□□ -1.06
TPM1-212ENST00000558347 AKR1E2Q96JD6 320 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 DUX5Q96PT3 197 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 SLC35B3Q9H1N7 401 aa8.43□□□□□ -1.06
TPM1-212ENST00000558347 SAV1Q9H4B6 383 aaPredicted RBP8.43□□□□□ -1.06
TPM1-212ENST00000558347 TMEM89A2RUT3 159 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 HAX1O00165 279 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 AGPAT2O15120 278 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 MT-ND4LP03901 98 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 CRYBA1P05813 215 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 NFYBP25208 207 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 PRDX2P32119 198 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 COMPP49747 757 aaPredicted RBP8.42□□□□□ -1.06
TPM1-212ENST00000558347 PPT1P50897 306 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 RAB5BP61020 215 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 HLA-DRB3P79483 266 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 PAX5Q02548 391 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 NHLH2Q02577 135 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 ZNF818PQ6ZRF7 136 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 C9orf139Q6ZV77 190 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 MRPL30Q8TCC3 161 aaKnown RBP8.42□□□□□ -1.06
TPM1-212ENST00000558347 SECTM1Q8WVN6 248 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 UNKLQ9H9P5 680 aaKnown RBP8.42□□□□□ -1.06
TPM1-212ENST00000558347 CMYA5Q8N3K9 4069 aa8.42□□□□□ -1.06
TPM1-212ENST00000558347 IGKV1D-17A0A075B6S4 117 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 A0A1B0GU03 582 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 MDFIC2A0A1B0GVS7 189 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 IGSF23A1L1A6 192 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 DNAJC9-AS1A6NH13 148 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 SIRPB1O00241 398 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 TMPRSS2O15393 492 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 ENSAO43768 121 aaKnown RBP8.41□□□□□ -1.06
TPM1-212ENST00000558347 SCTP09683 121 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 HERPUD1Q15011 391 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 STUMQ69YW2 141 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 RBMS3Q6XE24 437 aaKnown RBP8.41□□□□□ -1.06
TPM1-212ENST00000558347 BRD3OSQ6XYD6 125 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 H1FOOQ8IZA3 346 aaPredicted RBP8.41□□□□□ -1.06
TPM1-212ENST00000558347 TMEM252Q8N6L7 170 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 NEK7Q8TDX7 302 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 SDSLQ96GA7 329 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 CCL13Q99616 98 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 PCGF1Q9BSM1 259 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 EIF5A2Q9GZV4 153 aaKnown RBP8.41□□□□□ -1.06
TPM1-212ENST00000558347 KAAG1Q9UBP8 84 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 OR14J1Q9UGF5 321 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 OR2W1Q9Y3N9 320 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 TRRAPQ9Y4A5 3859 aa8.41□□□□□ -1.06
TPM1-212ENST00000558347 NBEAL1Q6ZS30 2694 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 IGKV1-6A0A0C4DH72 117 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 FAM24AA6NFZ4 105 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 C1orf196B1AJZ1 125 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 DVL1O14640 695 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 PSPNO60542 156 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 ZNF737O75373 536 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 PGLYRP1O75594 196 aaPredicted RBP8.4□□□□□ -1.06
TPM1-212ENST00000558347 DFFBO76075 338 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 HBE1P02100 147 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 TFF1P04155 84 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 PRTN3P24158 256 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 F2RP25116 425 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 MAS1LP35410 378 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 CEBPDP49716 269 aaPredicted RBP8.4□□□□□ -1.06
TPM1-212ENST00000558347 POLR2GP62487 172 aaKnown RBP eCLIP8.4□□□□□ -1.06
TPM1-212ENST00000558347 COL10A1Q03692 680 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 CLINT1Q14677 625 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 AWAT1Q58HT5 328 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 TMEM182Q6ZP80 229 aaPredicted RBP8.4□□□□□ -1.06
TPM1-212ENST00000558347 ZNF788Q6ZQV5 615 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms