RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 WDR7Q9Y4E6 1490 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 MAP3K1Q13233 1512 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 MAP3K4Q9Y6R4 1608 aa2.05□□□□□ -2.08
SYNE2-210ENST00000553455 A0A0G2JQZ4 141 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 C21orf140B9A014 251 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 SLC16A4O15374 487 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 RPL12P30050 165 aaKnown RBP2.04□□□□□ -2.08
SYNE2-210ENST00000553455 PLXNA3P51805 1871 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 ZNF140P52738 457 aaPredicted RBP2.04□□□□□ -2.08
SYNE2-210ENST00000553455 TAS2R30P59541 319 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 PLPPR5Q32ZL2 321 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 C1orf194Q5T5A4 169 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 ZCCHC11Q5TAX3 1644 aaKnown RBP2.04□□□□□ -2.08
SYNE2-210ENST00000553455 PPRC1Q5VV67 1664 aaKnown RBP2.04□□□□□ -2.08
SYNE2-210ENST00000553455 SBSNQ6UWP8 590 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 LRRN1Q6UXK5 716 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 GLT6D1Q7Z4J2 308 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 MAGI2Q86UL8 1455 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 ABCA9Q8IUA7 1624 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 CFAP43Q8NDM7 1665 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 PIGXQ8TBF5 258 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 SMCR5Q8TEV8 140 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 TXNDC17Q9BRA2 123 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 KIF15Q9NS87 1388 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 BABAM2Q9NXR7 383 aa2.04□□□□□ -2.08
SYNE2-210ENST00000553455 POLR3HQ9Y535 204 aaPredicted RBP2.04□□□□□ -2.08
SYNE2-210ENST00000553455 FBN1P35555 2871 aaKnown RBP2.04□□□□□ -2.08
SYNE2-210ENST00000553455 RAPGEF6Q8TEU7 1601 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 TEX14Q8IWB6 1497 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 KIAA1107Q9UPP5 1409 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 A0A087WUU8 490 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 A0A1W2PQD3 144 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 C9JCJ5 164 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 S1PR2O95136 353 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 APOMO95445 188 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 APOEP02649 317 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 ALOX5APP20292 161 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 CD24P25063 80 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 REG1BP48304 166 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 UAP1Q16222 522 aaPredicted RBP2.03□□□□□ -2.08
SYNE2-210ENST00000553455 SLC35F6Q8N357 371 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 UBL4BQ8N7F7 174 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 RNASE11Q8TAA1 199 aaKnown RBP2.03□□□□□ -2.08
SYNE2-210ENST00000553455 MIEN1Q9BRT3 115 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 FGFR1OP2Q9NVK5 253 aa2.03□□□□□ -2.08
SYNE2-210ENST00000553455 DICER1Q9UPY3 1922 aaKnown RBP2.03□□□□□ -2.08
SYNE2-210ENST00000553455 NYNRINQ9P2P1 1898 aaKnown RBP2.03□□□□□ -2.09
SYNE2-210ENST00000553455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.02□□□□□ -2.09
SYNE2-210ENST00000553455 CCDC18Q5T9S5 1454 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 MLH3Q9UHC1 1453 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 RTEL1-TNFRSF6BF6WH68 1400 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 CLIP1P30622 1438 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 TROQ12816 1431 aaPredicted RBP2.02□□□□□ -2.09
SYNE2-210ENST00000553455 SCN9AQ15858 1988 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 OVOL1O14753 267 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 RPS12P25398 132 aaKnown RBP2.02□□□□□ -2.09
SYNE2-210ENST00000553455 GABRA2P47869 451 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 TBPL1P62380 186 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 TPRXLQ17RH7 258 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 KRTAP13-4Q3LI77 160 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 HSP90B2PQ58FF3 399 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 AGTRAPQ6RW13 159 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 ZNF283Q8N7M2 679 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 JOSD2Q8TAC2 188 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 RAB8BQ92930 207 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 CCL13Q99616 98 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 TMEM222Q9H0R3 208 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 HRASLSQ9HDD0 168 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 PRO2289Q9P1D8 64 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 SLX4Q8IY92 1834 aa2.02□□□□□ -2.09
SYNE2-210ENST00000553455 FYCO1Q9BQS8 1478 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 MBD5Q9P267 1494 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 CEP162Q5TB80 1403 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 ABCC12Q96J65 1359 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 EVPLLA8MZ36 301 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 LRRN3E7EW58 273 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 H3BRN7 92 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 CCL1P22362 96 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 FKBP1AP62942 108 aaKnown RBP2.01□□□□□ -2.09
SYNE2-210ENST00000553455 RSU1Q15404 277 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 C1orf195Q5TG92 126 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 FAM78BQ5VT40 261 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 RASSF6Q6ZTQ3 369 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 OR2T27Q8NH04 317 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 RAB2BQ8WUD1 216 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 C12orf43Q96C57 262 aaKnown RBP2.01□□□□□ -2.09
SYNE2-210ENST00000553455 GNPNAT1Q96EK6 184 aaPredicted RBP2.01□□□□□ -2.09
SYNE2-210ENST00000553455 NMNAT3Q96T66 252 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 KLF6Q99612 283 aaPredicted RBP2.01□□□□□ -2.09
SYNE2-210ENST00000553455 TTTY13Q9BZ97 58 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 COQ4Q9Y3A0 265 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 SAMHD1Q9Y3Z3 626 aaKnown RBP2.01□□□□□ -2.09
SYNE2-210ENST00000553455 REREQ9P2R6 1566 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 ZMYM4Q5VZL5 1548 aa2.01□□□□□ -2.09
SYNE2-210ENST00000553455 DENND4BO75064 1496 aaPredicted RBP2.01□□□□□ -2.09
SYNE2-210ENST00000553455 MIA2Q96PC5 1412 aa2□□□□□ -2.09
SYNE2-210ENST00000553455 SCAPERQ9BY12 1400 aa2□□□□□ -2.09
SYNE2-210ENST00000553455 LRRIQ1Q96JM4 1722 aa2□□□□□ -2.09
SYNE2-210ENST00000553455 MAP3K5Q99683 1374 aa2□□□□□ -2.09
SYNE2-210ENST00000553455 HECW1Q76N89 1606 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms