RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ABCA11PQ4W5N1 156 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 OR10J3Q5JRS4 329 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 TIMM23BQ5SRD1 257 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 SAPCD1Q5SSQ6 148 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 Q6ZT83 130 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 MORN4Q8NDC4 146 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 WFDC11Q8NEX6 87 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 HGDQ93099 445 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 RNF5Q99942 180 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 SULT4A1Q9BR01 284 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 EMC6Q9BV81 110 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 METTL17Q9H7H0 456 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-207ENST00000544052 PLEKHF2Q9H8W4 249 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 IL20Q9NYY1 176 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 FBXL3Q9UKT7 428 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 RNF11Q9Y3C5 154 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 TBL2Q9Y4P3 447 aaKnown RBP2.22□□□□□ -2.05
SCFD1-207ENST00000544052 PLCE1Q9P212 2302 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 TRAV8-6A0A0B4J262 113 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 GOLGA6L10A6NI86 522 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 PSMD12O00232 456 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-207ENST00000544052 MPZL2O60487 215 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 UPK1BO75841 260 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 MPZL1O95297 269 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 IFNA16P05015 189 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 RPS17P08708 135 aaKnown RBP2.21□□□□□ -2.06
SCFD1-207ENST00000544052 COX5BP10606 129 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 NPY1RP25929 384 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 SSR2P43308 183 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 MAGEA2P43356 314 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 CMC4P56277 68 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-207ENST00000544052 VSNL1P62760 191 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 RAB31Q13636 194 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 KRTAP21-3Q3LHN1 58 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 FBXL19-AS1Q494R0 122 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 CLVS2Q5SYC1 327 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 ZNF738Q8NE65 137 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 OR5T1Q8NG75 326 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 OR5M1Q8NGP8 315 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 CPNE4Q96A23 557 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-207ENST00000544052 SLC25A46Q96AG3 418 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 PPP1R14BQ96C90 147 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 HBEGFQ99075 208 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 DCUN1D5Q9BTE7 237 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 EFCAB11Q9BUY7 163 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 UGT2B28Q9BY64 529 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 ACOT13Q9NPJ3 140 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 C1orf109Q9NX04 203 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 ARFGEF3Q5TH69 2177 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 MALRD1Q5VYJ5 2156 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 ABCA1O95477 2261 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 HEATR1Q9H583 2144 aaKnown RBP2.21□□□□□ -2.06
SCFD1-207ENST00000544052 ALPK2Q86TB3 2170 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 TRGV5A0A0B4J1U4 118 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 MYL12BO14950 172 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 UGT2B11O75310 529 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 OR5F1O95221 314 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 GPR75O95800 540 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 EPPINO95925 133 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 OPRM1P35372 400 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 ARR3P36575 388 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 CDKN2CP42773 168 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 CDK9P50750 372 aaKnown RBP2.21□□□□□ -2.06
SCFD1-207ENST00000544052 GNG11P61952 73 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 IL5RAQ01344 420 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 PLGLB1Q02325 96 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 STX4Q12846 297 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 TRMT12Q53H54 448 aaKnown RBP2.21□□□□□ -2.06
SCFD1-207ENST00000544052 NIPAL1Q6NVV3 410 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 MED27Q6P2C8 311 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 C3orf62Q6ZUJ4 267 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 SSX6Q7RTT6 188 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 NECAP1Q8NC96 275 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 S100PBPQ96BU1 408 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 CHMP6Q96FZ7 201 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 RILPQ96NA2 401 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 ZNF426Q9BUY5 554 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 CXorf21Q9HAI6 301 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 RHBDL2Q9NX52 303 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 C21orf62Q9NYP8 219 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 PCTPQ9UKL6 214 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 CFL2Q9Y281 166 aa2.21□□□□□ -2.06
SCFD1-207ENST00000544052 JMJD1CQ15652 2540 aa2.2□□□□□ -2.06
SCFD1-207ENST00000544052 FBN1P35555 2871 aaKnown RBP2.2□□□□□ -2.06
SCFD1-207ENST00000544052 A0A0A6YYH2 397 aa2.2□□□□□ -2.06
SCFD1-207ENST00000544052 TMEM213A2RRL7 107 aa2.2□□□□□ -2.06
SCFD1-207ENST00000544052 A6NJ64 397 aa2.2□□□□□ -2.06
SCFD1-207ENST00000544052 TMEM210A6NLX4 147 aa2.2□□□□□ -2.06
SCFD1-207ENST00000544052 A8MT66 165 aa2.2□□□□□ -2.06
SCFD1-207ENST00000544052 DEFB108AA8MXU0 73 aa2.2□□□□□ -2.06
SCFD1-207ENST00000544052 PDYNP01213 254 aa2.2□□□□□ -2.06
SCFD1-207ENST00000544052 IGKV1D-16P01601 117 aa2.2□□□□□ -2.06
SCFD1-207ENST00000544052 CD74P04233 296 aa2.2□□□□□ -2.06
SCFD1-207ENST00000544052 OR5AL1P0C617 328 aa2.2□□□□□ -2.06
SCFD1-207ENST00000544052 CPMP14384 443 aa2.2□□□□□ -2.06
SCFD1-207ENST00000544052 MUC1P15941 1255 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-207ENST00000544052 FOXA1P55317 472 aa2.2□□□□□ -2.06
SCFD1-207ENST00000544052 FADDQ13158 208 aa2.2□□□□□ -2.06
SCFD1-207ENST00000544052 EIF4EBP1Q13541 118 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-207ENST00000544052 YIF1BQ5BJH7 314 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms