RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 GPX1P07203 203 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 WIPI1Q5MNZ9 446 aaPredicted RBP10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 SPATA46Q5T0L3 261 aa10.8□□□□□ -0.68
SFSWAP-209ENST00000540469 FRMD6-AS1P0C7T7 363 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 NXPH1P58417 271 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 LINC00310P59036 64 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 MRPL54Q6P161 138 aaKnown RBP10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 MOB1BQ7L9L4 216 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 RPS19BP1Q86WX3 136 aaKnown RBP10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 GCM1Q9NP62 436 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 DPRXA6NFQ7 191 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 IGLV3-19P01714 112 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 MIC13Q5XKP0 118 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 LYG1Q8N1E2 194 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 SPSB4Q96A44 273 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 GMPPAQ96IJ6 420 aaPredicted RBP10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 ZNF703Q9H7S9 590 aaPredicted RBP10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 SLC35D1Q9NTN3 355 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 FAM166BA8MTA8 275 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 IGLV2-14P01704 120 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 SRIP30626 198 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 DEPPQ9NTK1 212 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 RNF114Q9Y508 228 aa10.79□□□□□ -0.68
SFSWAP-209ENST00000540469 PRSS47A8MTI9 375 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 IGLC2P0DOY2 106 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 IGLC3P0DOY3 106 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 FXYD3Q14802 87 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 LTC4SQ16873 150 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 WDR74Q6RFH5 385 aaPredicted RBP10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 PRRG4Q9BZD6 226 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 FAM234AQ9H0X4 552 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 KNTC1P50748 2209 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 ZNF716A6NP11 495 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 GDF9O60383 454 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 CXorf1O96002 111 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 MGST1P10620 155 aaKnown RBP10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 LTBRP36941 435 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 STUMQ69YW2 141 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 S100A7AQ86SG5 101 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 LINC00596Q86U02 117 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 ORAOV1Q8WV07 137 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 MT-CO2P00403 227 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 RPH3ALQ9UNE2 315 aa10.78□□□□□ -0.68
SFSWAP-209ENST00000540469 NKX6-3A6NJ46 265 aa10.77□□□□□ -0.69
SFSWAP-209ENST00000540469 C17orf98A8MV24 154 aa10.77□□□□□ -0.69
SFSWAP-209ENST00000540469 NDUFB8O95169 186 aa10.77□□□□□ -0.69
SFSWAP-209ENST00000540469 OR2H2O95918 312 aa10.77□□□□□ -0.69
SFSWAP-209ENST00000540469 GDF1P27539 372 aa10.77□□□□□ -0.69
SFSWAP-209ENST00000540469 RPL30P62888 115 aaKnown RBP10.77□□□□□ -0.69
SFSWAP-209ENST00000540469 UBE2V1Q13404 147 aa10.77□□□□□ -0.69
SFSWAP-209ENST00000540469 SLC25A45Q8N413 288 aa10.77□□□□□ -0.69
SFSWAP-209ENST00000540469 GALMQ96C23 342 aa10.77□□□□□ -0.69
SFSWAP-209ENST00000540469 GNG4P50150 75 aa10.77□□□□□ -0.69
SFSWAP-209ENST00000540469 IFI44Q8TCB0 444 aa10.77□□□□□ -0.69
SFSWAP-209ENST00000540469 KCNS1Q96KK3 526 aa10.77□□□□□ -0.69
SFSWAP-209ENST00000540469 ACTL6BO94805 426 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 C3orf79P0CE67 100 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 COMPP49747 757 aaPredicted RBP10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 Q56UQ5 140 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 RIPPLY2Q5TAB7 128 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 WDR73Q6P4I2 378 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 AGBL5Q8NDL9 886 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 OR52L2PQ8NGH6 319 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 PLPPR2Q96GM1 343 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 HSBP1O75506 76 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 Q0VG73 95 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 PRAMEF5Q5TYX0 476 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 PRAMEF6Q5VXH4 476 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 LCN12Q6JVE5 192 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 DOLPP1Q86YN1 238 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 ZNF645Q8N7E2 425 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 RCHY1Q96PM5 261 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 ZPBPQ9BS86 351 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 WDR83OSQ9Y284 106 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 TRBV6-6A0A0A6YYG2 114 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 IGHV3-43A0A0B4J1X8 118 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 OR5B21A6NL26 309 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 IGHV3-43DP0DP04 118 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 LGALS4P56470 323 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 PCOLCEQ15113 449 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 Q5PR19 223 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 FAM53AQ6NSI3 398 aaPredicted RBP10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 VASH2Q86V25 355 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 KCNE4Q8WWG9 221 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 TXNDC17Q9BRA2 123 aa10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 UBE2ZQ9H832 354 aaPredicted RBP10.76□□□□□ -0.69
SFSWAP-209ENST00000540469 A0A0G2JMM0 328 aa10.75□□□□□ -0.69
SFSWAP-209ENST00000540469 A0A1W2PPB8 328 aa10.75□□□□□ -0.69
SFSWAP-209ENST00000540469 A0A1W2PRS3 328 aa10.75□□□□□ -0.69
SFSWAP-209ENST00000540469 KIR3DP1A8MWS1 328 aa10.75□□□□□ -0.69
SFSWAP-209ENST00000540469 DEFB108AA8MXU0 73 aa10.75□□□□□ -0.69
SFSWAP-209ENST00000540469 DNPH1O43598 174 aa10.75□□□□□ -0.69
SFSWAP-209ENST00000540469 ZNF324O75467 553 aaPredicted RBP10.75□□□□□ -0.69
SFSWAP-209ENST00000540469 TIGITQ495A1 244 aa10.75□□□□□ -0.69
SFSWAP-209ENST00000540469 FBLN7Q53RD9 439 aa10.75□□□□□ -0.69
SFSWAP-209ENST00000540469 TRAV9-1A0A075B6T8 112 aa10.75□□□□□ -0.69
SFSWAP-209ENST00000540469 GRPP07492 148 aa10.75□□□□□ -0.69
SFSWAP-209ENST00000540469 ESDP10768 282 aa10.75□□□□□ -0.69
SFSWAP-209ENST00000540469 GABRA2P47869 451 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms